DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and acc-1

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001293865.1 Gene:acc-1 / 177799 WormBaseID:WBGene00010275 Length:470 Species:Caenorhabditis elegans


Alignment Length:454 Identity:130/454 - (28%)
Similarity:205/454 - (45%) Gaps:77/454 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LEQSIQHCHCVHGYRNNTESAELVSHYESSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTV 88
            :.||:.:|      .|:||....:        |.|       :|:|:..|   ..||.|...:.|
 Worm    27 IAQSLDNC------ANDTEIINAL--------LKD-------SYNKHYIP---SHPTHVRVDMWV 67

  Fly    89 LSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDVD--WLHSIWRPDCFFKNAKKVT 151
            ..:.|::|.:..:..|:::.:.|.||.| :.|:|:...|.:..|  .|..:|.|:..|.|:|...
 Worm    68 QEVTSVSELTQDFEIDLYINEFWEDPAL-VYEDMNPCKRNISFDDKVLQRLWLPNTCFINSKSAA 131

  Fly   152 FHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNM 216
            .||....|.:|.::.:.||....::.|...|.||.:.:|.|.|.|.:..||.::...::...||.
 Worm   132 IHESPFKNVFLMVFSNGTLWTNYRMKLTGPCDMKLKRFPFDKQKCYLTFESFNYNTGEVRMQWNQ 196

  Fly   217 TDPLVVNTEIELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMS 281
            ..|:::...||||...:.|.........|..|.:..|.:.|...||.|:::...|||:.:.:|:|
 Worm   197 PYPVILLKRIELPDFKLVNFSVIAVEQMYPAGWWDELTVAFVFERRYGWYVLQGYIPTMVTIVIS 261

  Fly   282 WISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAV 346
            ||||::.|.|||||..|||.|||.:..|.....::||.|||||||||||.|..:|:||||:|.||
 Worm   262 WISFYLGPRAIPARTMLGVNSLLAMTFQFGNIIRNLPRVSYVKAIDVWMLSGMLFIFLSLLELAV 326

  Fly   347 VNNFMG-----PVATKAMK-------GYS-----------------DENISDL--DDLKSALQHH 380
            | .||.     |...|..|       |:|                 |:.::.|  |.....::.:
 Worm   327 V-GFMSRNEGLPPKVKKRKRQEDDDEGFSWKSMQTSPHLELRQFWVDKRVNSLRNDSAVPPVEDY 390

  Fly   381 RESIIEPQYDTFCHGHATAIY------------------IDKFSRFFFPFSFFILNIVYWTTFL 426
            ....:|..|...........:                  :|.:|..|||.::.:.||.||:.:|
 Worm   391 APMELEQPYQNITKRREKRKWMSGLRKKWRAMRELRPETVDFYSAIFFPTAYMLFNISYWSFYL 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 52/196 (27%)
Neur_chan_memb 270..>350 CDD:280999 45/79 (57%)
acc-1NP_001293865.1 Neur_chan_LBD 38..243 CDD:280998 57/223 (26%)
LIC 39..453 CDD:273305 124/433 (29%)
Neur_chan_memb 251..450 CDD:280999 64/199 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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