DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HisCl1 and glc-2

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_491470.1 Gene:glc-2 / 172103 WormBaseID:WBGene00001592 Length:434 Species:Caenorhabditis elegans


Alignment Length:419 Identity:130/419 - (31%)
Similarity:203/419 - (48%) Gaps:53/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LVSHYESSL-SLPDILPIPSKTYDKNRAPKLLGQPTV----VYFHVTVLSLDSINEESMTYVTDI 105
            :|::.|.|: |..:||....|.||....|......|.    |..::.:..|..|:..:|.|...:
 Worm    18 VVTNGEYSMQSEQEILNALLKNYDMRVRPPPANSSTEGAVNVRVNIMIRMLSKIDVVNMEYSIQL 82

  Fly   106 FLAQSWRDPRLRLPENMS--EQYRILDVDWL-HSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHD 167
            ...:.|.||||.. ||:.  .....|.|..: .|:|.||.||...|....|.:.:.|.:|.:|.|
 Worm    83 TFREQWIDPRLAY-ENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPD 146

  Fly   168 KTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEI--ELPQ 230
            ..:||.|:::|..||.|:.:.||.|.|.|:..:.|.:||:.|:::.|:.:.|:.:...:  :||.
 Worm   147 GKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPN 211

  Fly   231 LDISNNYTT--DCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIP 293
            . |..||||  |||...:||::.||.:....:|:..|:|...|.|:.:||::||:||||...:..
 Worm   212 F-ILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTA 275

  Fly   294 ARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVATKA 358
            .||.||||:|||:.|..:.....||||||||.:|||:.:|..|||.:|:|:|.|:          
 Worm   276 GRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGACQTFVFGALLEYAFVS---------- 330

  Fly   359 MKGYSD---ENISDLDDLKSALQHHRESIIEPQYDTF-----CHG-HATAIYIDK---------- 404
               |.|   :|....:......|..||.:.....:.:     ||. .|...:.||          
 Worm   331 ---YQDSVRQNDRSREKAARKAQRRREKLEMVDAEVYQPPCTCHTFEARETFRDKVRRYFTKPDY 392

  Fly   405 -------FSRFFFPFSFFILNIVYWTTFL 426
                   ::||..|.:|...|::||.:.|
 Worm   393 LPAKIDFYARFVVPLAFLAFNVIYWVSCL 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 62/205 (30%)
Neur_chan_memb 270..>350 CDD:280999 39/79 (49%)
glc-2NP_491470.1 LIC 29..419 CDD:273305 125/404 (31%)
Neur_chan_LBD 29..244 CDD:280998 65/216 (30%)
Neur_chan_memb 252..417 CDD:280999 55/177 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

Return to query results.
Submit another query.