DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and Gabrr1

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_032101.3 Gene:Gabrr1 / 14408 MGIID:95625 Length:480 Species:Mus musculus


Alignment Length:406 Identity:137/406 - (33%)
Similarity:202/406 - (49%) Gaps:58/406 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLP--ENMSEQYRIL 129
            :|.:..|...|....|...|.|.|||||:|..|.:...::|...|:|.||..|  .|:|..:   
Mouse    85 HDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSSNNLSMTF--- 146

  Fly   130 DVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQ 194
            |...:..||.||.||.::|:...|:.:..|..|.:..|..:||..::|:...|.|.|..:|.|||
Mouse   147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQ 211

  Fly   195 ICSMMIESLSHTVEDLVFIWNM-TDPLVVNTEIELPQLDISNNYTTDCTIEY-STGNFTCLAIVF 257
            .||:.|||.::|.:||:..|.. .|.|..:..|.|.|..|...:||.....| |||.:..|.|.|
Mouse   212 TCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINF 276

  Fly   258 NLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSY 322
            .|||.:.:.|..||.|:.|:|::||:||||...|:||||.||:|::||::|..|....|:|.|||
Mouse   277 TLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341

  Fly   323 VKAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVATKAMK---------------------GYSDEN 366
            :||:|:::....||||||::|:|.||........|..|                     .|||..
Mouse   342 IKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKISCTCGLPQPRGVMLDSSYSDGE 406

  Fly   367 ISDL-----------DDLKSAL-----------QHHRESIIEPQYDTFCHGHATAIYIDKFSRFF 409
            ::||           |.:...|           :..|.|.:..:.:|    ||    |||:||..
Mouse   407 VNDLGGYMPENGEKPDRMMVQLTLASERGSPQRKGQRGSYVSMRINT----HA----IDKYSRII 463

  Fly   410 FPFSFFILNIVYWTTF 425
            ||.::.:.|::||:.|
Mouse   464 FPAAYILFNLIYWSIF 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 69/198 (35%)
Neur_chan_memb 270..>350 CDD:280999 41/79 (52%)
Gabrr1NP_032101.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..67
LIC 76..479 CDD:273305 136/404 (34%)
Neur_chan_LBD 77..282 CDD:280998 70/199 (35%)
Neur_chan_memb 289..476 CDD:280999 63/194 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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