DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and Gabrg1

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_034382.2 Gene:Gabrg1 / 14405 MGIID:103156 Length:465 Species:Mus musculus


Alignment Length:403 Identity:124/403 - (30%)
Similarity:202/403 - (50%) Gaps:57/403 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDV 131
            ||....|.:..:|||:...|.|.|:..::..:|.|..||..||:|.|.||:.  |.:.:..:|:.
Mouse    75 YDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDSRLKF--NSTMKVLMLNS 137

  Fly   132 DWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 196
            :.:..||.||.||:|::|...|.::.||..|.::.|..:||..:||:...|.::..::|.|...|
Mouse   138 NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRLTINAECYLQLHNFPMDEHSC 202

  Fly   197 SMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQ---------LDISNNYTTDCTIEYSTGNFTC 252
            .:...|..:...::.:.|...     :.|:..|:         :.:.|:.....||   :|::..
Mouse   203 PLEFSSYGYPKNEIEYKWKKP-----SVEVADPKYWRLYQFAFVGLRNSTEISHTI---SGDYII 259

  Fly   253 LAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSL 317
            :.|.|:|.||:||....||||..|.||:||:||||..:|:|||.:||:|::||:.|.:|.:::||
Mouse   260 MTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSL 324

  Fly   318 PPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVATKAMKGYSDENISDLDDLKSALQHHRE 382
            |.||||.|:|:::|.|.:|||.:|||:..::.|......|..:|...:|.:.    .|...|...
Mouse   325 PKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFTSNNKGKTTRGRKLKNKTS----ASPGLHAGS 385

  Fly   383 SII----------EPQY-----------DTFC-----------HG--HATAIYIDKFSRFFFPFS 413
            ::|          |..|           ..||           .|  |.....||.:||.|||.:
Mouse   386 TLIPMNSISLPQGEDDYGYQCLEGKDCTSFFCCFDDCRTGSWREGRIHIRIAKIDSYSRIFFPTA 450

  Fly   414 FFILNIVYWTTFL 426
            |.:.|:|||..:|
Mouse   451 FALFNLVYWVGYL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 53/203 (26%)
Neur_chan_memb 270..>350 CDD:280999 41/79 (52%)
Gabrg1NP_034382.2 Neur_chan_LBD 65..270 CDD:280998 54/204 (26%)
LIC 66..462 CDD:273305 123/400 (31%)
Neur_chan_memb 277..459 CDD:280999 64/185 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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