DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and gabrp

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_017948119.2 Gene:gabrp / 100498164 XenbaseID:XB-GENE-1012959 Length:401 Species:Xenopus tropicalis


Alignment Length:403 Identity:124/403 - (30%)
Similarity:205/403 - (50%) Gaps:56/403 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRIL 129
            |.|:|...||...:|..:...:.|.|:|:::||:|.|...|.|.|.|.|.||....|.|   ..|
 Frog    12 KDYNKYLRPKFNEKPIEIAVSLEVASIDAVSEENMDYTATINLRQRWTDERLVFEGNRS---ITL 73

  Fly   130 DVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQ 194
            |...:.|:|.||.:..::||...|::::.|..:.|:.:.|:||..::|..::|.|....||.|.|
 Frog    74 DARLVESLWVPDTYIVDSKKSFLHDVTVENRLVRLFANGTVLYAIRITTTVACKMDLTKYPMDRQ 138

  Fly   195 ICSMMIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDISNNYTTDCTIEYSTGNFTCLAIVFN 258
            .|.:.:||..::.:||.::|...:..|...: ::|.|..:...|||:...:..|||:..||:.|.
 Frog   139 TCKLQLESWGYSEKDLTYVWMRANDSVRGMDHLQLAQYTVEQYYTTNSIGKDETGNYPRLALCFI 203

  Fly   259 LRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVS-Y 322
            |||.:.|.:..|||||||:||:||:||||...::|||...|||::|.:.|....|:.:.|..: .
 Frog   204 LRRNVVYFILETYIPSALLVVLSWVSFWISMSSVPARTCFGVTTVLAMTTIMMGSRFNFPTANCI 268

  Fly   323 VKAIDVWMSSCSVFVFLSLMEFA----------------VVNNFMGP--------VATKA----M 359
            :|||||::..|..|||.:|:|:|                :.|:...|        :|..:    .
 Frog   269 IKAIDVYLGICFSFVFGALLEYAFAHYCSELNSAVNKEKIKNSLEEPEHDISSVLIACDSKQLNR 333

  Fly   360 KGYSDENISDLDDLKSA-----------LQHHRESIIEPQYDTFCHGHATAIYIDKFSRFFFPFS 413
            |....||..:.:.||::           ::..:.::..|:            .:|::||..||..
 Frog   334 KENQTENAPEKNSLKNSVIFKLWLKIKIIRLKKFNVTNPE------------NVDRYSRTVFPLI 386

  Fly   414 FFILNIVYWTTFL 426
            |.|:||:|||.:|
 Frog   387 FLIINIIYWTYYL 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 62/195 (32%)
Neur_chan_memb 270..>350 CDD:280999 38/96 (40%)
gabrpXP_017948119.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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