DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and XB5799637

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_031762346.1 Gene:XB5799637 / 100490720 XenbaseID:XB-GENE-5799638 Length:409 Species:Xenopus tropicalis


Alignment Length:398 Identity:125/398 - (31%)
Similarity:207/398 - (52%) Gaps:30/398 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPE 120
            ||..:....|.|:|...|.....|..|...:.:.|:|:|:|.:|.|...|||.|.|.|.||....
 Frog    13 LPPTIQKLMKGYNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCFES 77

  Fly   121 NMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMK 185
            |.|..   ||...:..:|.||.|..::||...|:|::.|..:.:|.:.|:||..::|..::|:|.
 Frog    78 NKSLS---LDGRLVELLWVPDTFIVDSKKSFLHDMTVENRLIRIYPNGTVLYALRITTTVACSMD 139

  Fly   186 FESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDISNNYTTDCTIEYSTGN 249
            ...||.|.|.|::.:||.|:...|::|.|...:..|...: :.|.|..:.::||:.....|.||.
 Frog   140 LTKYPMDKQTCTLXLESWSYNTNDVMFYWTRGNDSVRGLDALRLAQYAVEDHYTSVSEAVYETGR 204

  Fly   250 FTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQ 314
            :..|...|:|:|.:.|.:..||:||.|:||:||:||||...::|||:.:|||::||:.|....::
 Frog   205 YPKLVFHFDLKRNILYFILETYVPSILLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGAR 269

  Fly   315 QSLPPVS-YVKAIDVWMSSCSVFVFLSLMEFAVVNNF---MGPVATKAMKGYSDENISDLDDLKS 375
            .|||..: ::|||||::..|..|:|.:|:|:|:.:.:   ........:|....|:.:|::...|
 Frog   270 TSLPNANCFIKAIDVYLGICFSFIFGALLEYAIAHFYTLHQPHQKNSTIKKLVAEDEADMNGTIS 334

  Fly   376 AL---QHHR--------------ESIIEPQYDT-----FCHGHATAIYIDKFSRFFFPFSFFILN 418
            |:   |.|:              :|.::|....     :|........||.:||..||.||.|:|
 Frog   335 AVSDGQSHQTEPPDEIGNGKKKIKSPVDPVLKRLLCVFYCFQVQNPHDIDNYSRISFPLSFMIIN 399

  Fly   419 IVYWTTFL 426
            :.||..:|
 Frog   400 VFYWAYYL 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 61/195 (31%)
Neur_chan_memb 270..>350 CDD:280999 36/80 (45%)
XB5799637XP_031762346.1 LIC 2..406 CDD:273305 124/395 (31%)
LGIC_ECD_GABAAR_pi 36..217 CDD:349805 58/183 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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