DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and glra3

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_002933371.1 Gene:glra3 / 100488938 XenbaseID:XB-GENE-1011160 Length:449 Species:Xenopus tropicalis


Alignment Length:427 Identity:157/427 - (36%)
Similarity:220/427 - (51%) Gaps:60/427 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TESAELVSHYESSLSLPDIL-PIPSKT--YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYV 102
            |:..:......|.:|..|.| .:..:|  ||....|...|.|..|..::.|.|..||.|.:|.|.
 Frog    28 TKETDSARSRPSPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFVNSFGSIAETTMDYR 92

  Fly   103 TDIFLAQSWRDPRLRLPENMSEQYRILDVD--WLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLY 165
            .:|||.|.|.||||...|...:.   ||:|  .|.|||:||.||.|.|...|||::..|..|.::
 Frog    93 LNIFLRQKWNDPRLAYSEYPDDS---LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIF 154

  Fly   166 HDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQ 230
            .|..:||..:|||.|||.|..:::|.|.|.|.|.:||..:|:.||:|.|....|:.:...:.|||
 Frog   155 KDGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQIADGLTLPQ 219

  Fly   231 LDISN----NYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEA 291
            ..:..    .|   ||..|:||.|||:.:.|:|.|::||:|...||||.|||::||:||||..:|
 Frog   220 FVLKEEKDLRY---CTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDA 281

  Fly   292 IPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVN-------- 348
            .||||.||:|::||:.||::.|:.|||.||||||||:||:.|.:|||.:|:|:|.||        
 Frog   282 APARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKE 346

  Fly   349 ---------------------NF----MGPVATKAMKGYSDENISDLDDLKSALQHHRESIIEPQ 388
                                 :|    ||| ..:|..|.:.:...:........:..|:..|:  
 Frog   347 LLRFRRKRKKDRDDDVRESRFSFTAYGMGP-CLQAKDGVNPKGPLNAPPAPKTHEEMRKVFID-- 408

  Fly   389 YDTFCHGHATAIYIDKFSRFFFPFSFFILNIVYWTTF 425
                     .|..||..||..||.:|.|.||.||..:
 Frog   409 ---------RAKKIDTLSRACFPLAFLIFNIFYWVIY 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 78/200 (39%)
Neur_chan_memb 270..>350 CDD:280999 48/108 (44%)
glra3XP_002933371.1 LIC 12..436 CDD:273305 157/425 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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