DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and LOC100001259

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_021336767.1 Gene:LOC100001259 / 100001259 -ID:- Length:369 Species:Danio rerio


Alignment Length:311 Identity:109/311 - (35%)
Similarity:171/311 - (54%) Gaps:16/311 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRL--PENMSEQYRIL 129
            ||....|.|..:.|.|...:.|.|...:::..|.|..|:|..|||:|.||:.  |.|:.....::
Zfish    50 YDNRLRPGLGDRVTTVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFEGPMNILRLNNLM 114

  Fly   130 DVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQ 194
                ...||.||.||.|.||...|.|::||..|.:..|.||||..:||:...|.|..|.:|.|..
Zfish   115 ----ASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFH 175

  Fly   195 ICSMMIESLSHTVEDLVFIW--NMTDPLVVNTE-IELPQLDISNNYTTDCTIEYSTGNFTCLAIV 256
            .|.:...|.::|..::.:.|  |.::.:||..| ..|.|.|:......:.||..|||.:|.:...
Zfish   176 SCPLKFGSYAYTTTEVTYTWTKNASNSVVVEEESSRLNQYDLLGQTVGNETIRSSTGEYTVMTAH 240

  Fly   257 FNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVS 321
            |:|:|::||.:..||:|..:.|::|.:|||:..|::|||...|||::||:.|.:..::.|||.|:
Zfish   241 FHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVA 305

  Fly   322 YVKAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVATKAMKGYSDENISDLDD 372
            |..|:|.:::.|..|||.:|:|||.||.|     ||  :|::.:..|.::|
Zfish   306 YATAMDWFIAVCYAFVFSALIEFATVNYF-----TK--RGWAWDGKSVVND 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 65/199 (33%)
Neur_chan_memb 270..>350 CDD:280999 35/79 (44%)
LOC100001259XP_021336767.1 Neur_chan_LBD 7..>350 CDD:332142 109/311 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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