DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd1 and T10B10.3

DIOPT Version :9

Sequence 1:NP_650115.1 Gene:prd1 / 41425 FlyBaseID:FBgn0037949 Length:1354 Species:Drosophila melanogaster
Sequence 2:NP_510523.1 Gene:T10B10.3 / 181612 WormBaseID:WBGene00011680 Length:741 Species:Caenorhabditis elegans


Alignment Length:801 Identity:134/801 - (16%)
Similarity:258/801 - (32%) Gaps:271/801 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   528 QHTSVASLLE-------QNTPIAEPAASQIKKSF--LDAPIAKTF---------SNFFRSFKDST 574
            ||....:|:|       :.|.|.:......:|.|  :|     ||         ..::|..:...
 Worm    19 QHGEFQNLVEGYVNKILRETDIVDAENPNGRKLFNSID-----TFFSYGLLTGDGTYWRCIRTFL 78

  Fly   575 PVAKDEQAVTDNYFASKIAKPQQQAPAAGKLQRNFSSSTISEPSSNTNTSSNHQIAMNPQLGNAE 639
            |.|:.:..:.:                .|.....|.|....:.|.|..|.....:|:|.|...|.
 Worm    79 PRAEQKMLIAE----------------CGNANDRFLSVGWLKTSFNKGTLHFILLALNNQSNKAY 127

  Fly   640 -RQSRHLPSPLKKRG---------QPLQPPRYYDQQHPHQSRSLHSPSAYLAAGRGGP-----GG 689
             .:..|:.:.::..|         :.|||.::..    :.:|.|.:..|..|.....|     ..
 Worm   128 LTKFYHINACIRNSGLLEAITQFIEKLQPVQFAF----YSTRQLRAEPAPAAVIDSTPTQLSLRA 188

  Fly   690 SGRDSKSTILSEEFDDILTITTTDTTN--ARSMDSDLVI------------VDYTDVDYAHLLKP 740
            ..|..|.|......|.:..:..|:..:  ::::|.|:::            .:..|..:....:.
 Worm   189 QARQRKLTEKEASQDTVPNVIPTEIPSILSQAIDQDVLLDELVRTRHNRLNTELFDAQHEENNED 253

  Fly   741 PAPAAKTSLINRFLRNVTQKKIMETSIRKNNFFADKLRTEQRHAGSDLYVKGARPKNYELIDDLN 805
            .||:... ::...|.:|..||:                       |.:.::...|...|      
 Worm   254 NAPSPSV-IVEEKLEDVMTKKM-----------------------SCVNMESMNPDGIE------ 288

  Fly   806 AEIAMEIEMCGTNSPRRELAISLDNDFQGNLSNFELGIGEISIDVFKGKSLFNLKQSNEQLMKAF 870
             .|...:|......|...||   |.::|.:..:    :..::|:||        ::|:|::::.|
 Worm   289 -HILASVEPDDMVLPEYNLA---DGEYQMSQGD----VLHLAINVF--------EKSSEKIIECF 337

  Fly   871 KLYTGYNVDGIMTPVLVLLTDKTLYV---------------VNMEGNSLCVK-FVLAYKDLDVIL 919
            |:...::.|.:....|| :|:..:||               .|:......:. |.:.:..:..|.
 Worm   338 KVIESFHSDNMKLRYLV-MTNYNVYVFKYRTHTQNSSPGKTTNLSSEGFFIPLFRMPHDRIKTIK 401

  Fly   920 MGPFGNTVLLS-----------NSNRDMQQVLLAGGPYPAGSLVANLELCARRSGSTLPAVGQLT 973
            :.....:.:|.           :..:|.|.|....|.      :|.||     ||:         
 Worm   402 ISVDNLSFMLEANEEGFSHYVHSEEKDDQTVFAYVGS------MAGLE-----SGA--------- 446

  Fly   974 LEHLAPLQAFVRANSCVGVAEHWMLYAVVNVPAGGSMRVESPSE---------LLGPSMKGFLMH 1029
              |:        .||.:.:.||            .|.::.:.:|         :|.|:::     
 Worm   447 --HM--------INSLINLVEH------------SSRQITNHAEVDDHIGYMCMLQPNLE----- 484

  Fly  1030 RRLRQTISTSAANRIFWQPGYF-------LLKAGVLYMFNDSTQRLPSWAMALAECQG------- 1080
            ::|.:||...||...||....:       ..|:|.|:..|     :.:|..:..|.:.       
 Worm   485 KQLGRTIDVRAATLCFWYEQTYEERERSTATKSGFLFKSN-----IGNWIKSSDEAEQKYCMIVG 544

  Fly  1081 ------ARRTVKSERPHCFEITLKGE--------VLQMAA---------PDEYVASEWLQALLQS 1122
                  |..|.|:|.   ..|:|.|.        ..||.|         |.:....||.:.|...
 Worm   545 NNFNVFADSTCKTEE---LVISLSGSSINSTGRVAFQMKAAEGTFEFECPTQEDQIEWTRILTMI 606

  Fly  1123 ASGLVVQEEKHKTLGCTLIVTDNHLITLRE-------DFSAPLRKIS----------QQADNNAA 1170
            |.....|.   ....|..:||:..:..::|       .|...|.::.          :|.::..:
 Worm   607 AENKTTQP---YMASCLAVVTETCIALVQEGEKFWSDGFLRLLNEVGGINVKQSVVVRQPEDKES 668

  Fly  1171 VQGNKETML----EEDMLSVF 1187
            ..||:...|    ::|.:..|
 Worm   669 FFGNRSPALCLVTKDDTIHYF 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prd1NP_650115.1 PH 1021..1119 CDD:278594 27/134 (20%)
PH_SKIP 1022..1126 CDD:270119 28/140 (20%)
T10B10.3NP_510523.1 PH 515..608 CDD:278594 20/100 (20%)
PH 515..607 CDD:214574 20/99 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46556
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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