DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)neo38 and SP3

DIOPT Version :9

Sequence 1:NP_001262485.1 Gene:l(3)neo38 / 41423 FlyBaseID:FBgn0265276 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_003102.1 Gene:SP3 / 6670 HGNCID:11208 Length:781 Species:Homo sapiens


Alignment Length:550 Identity:109/550 - (19%)
Similarity:179/550 - (32%) Gaps:149/550 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGPFSGIHQFAAKFDAQTPGAFGTPPAAAANAAAAAAAAGTDNHVQRYQTNGNHFNQNVPNVSAA 72
            |..|.|..|..|......||.....|..:.:..:...:..:.........:|:..|......|:.
Human   243 GSSFPGQTQVVANVPLGLPGNITFVPINSVDLDSLGLSGSSQTMTAGINADGHLINTGQAMDSSD 307

  Fly    73 NNMQYGQNISIPYSQPQGDLNFL---------------------NAAAAADHKGKIHPKIERDRE 116
            |:.:.|:.:|...::...|.:..                     |..:.....|::|   ..|.:
Human   308 NSERTGERVSPDINETNTDTDLFVPTSSSSQLPVTIDSTGILQQNTNSLTTSSGQVH---SSDLQ 369

  Fly   117 EVLNQQILQNVNQSWQTLANTANTVDYSSHLLSATLPISIQHFLKYSETIKKESTGDVLKNGTNL 181
            ....|..:....|:.....:||..|.....|..:..|.|....:   :.|..::...|..:|.|:
Human   370 GNYIQSPVSEETQAQNIQVSTAQPVVQHLQLQESQQPTSQAQIV---QGITPQTIHGVQASGQNI 431

  Fly   182 ASLALGGVAL--------------TPSNNGANGGHHNGLVGMDHGGHMTNMT-------DANGAA 225
            :..||..:.|              |||                  |.:|..|       :.....
Human   432 SQQALQNLQLQLNPGTFLIQAQTVTPS------------------GQVTWQTFQVQGVQNLQNLQ 478

  Fly   226 LTNGASNGVNGNANGTVTNGGAGAVSSSGSVGTTNASGGTGTASGKKT----------------K 274
            :.|.|:..:......|:|   .|.|::.|:..:|..|..||.....:|                :
Human   479 IQNTAAQQITLTPVQTLT---LGQVAAGGAFTSTPVSLSTGQLPNLQTVTVNSIDSAGIQLHPGE 540

  Fly   275 KKKPP-----KEKKPRPKPGEIRETKALDGSTL-------------------------YC-CPEC 308
            ....|     ||::|.|:..::.....|:.:.|                         .| ||.|
Human   541 NADSPADIRIKEEEPDPEEWQLSGDSTLNTNDLTHLRVQVVDEEGDQQHQEGKRLRRVACTCPNC 605

  Fly   309 QMAYPDRSLIEQHVISHAVERRFVCDI--CNAALKRKDHLTRHKLSHIPDRPHVCN--ICMKSFK 369
            :......:.:.:       :::.:|.|  |.....:..||..|...|..:||.|||  .|.|.|.
Human   606 KEGGGRGTNLGK-------KKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNWMYCGKRFT 663

  Fly   370 RKEQLTLHIVIHSGEKKHVCIECGKGFYRKDHLRKHTRSHIARR---------VKSEVSAQNVNG 425
            |.::|..|...|:||||.||.||.|.|.|.|||.||.::|..::         ...|.:..:...
Human   664 RSDELQRHRRTHTGEKKFVCPECSKRFMRSDHLAKHIKTHQNKKGIHSSSTVLASVEAARDDTLI 728

  Fly   426 SAGG-------------GGGGGGGNSAQSN 442
            :|||             .|.|....||.||
Human   729 TAGGTTLILANIQQGSVSGIGTVNTSATSN 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)neo38NP_001262485.1 C2H2 Zn finger 305..325 CDD:275368 3/19 (16%)
zf-C2H2_8 306..391 CDD:292531 27/88 (31%)
C2H2 Zn finger 333..353 CDD:275368 6/21 (29%)
zf-H2C2_2 345..370 CDD:290200 12/26 (46%)
C2H2 Zn finger 361..381 CDD:275368 8/21 (38%)
zf-H2C2_2 374..398 CDD:290200 13/23 (57%)
C2H2 Zn finger 389..409 CDD:275368 11/19 (58%)
SP3NP_003102.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..88
Transactivation domain (Gln-rich) 138..237
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 301..338 5/36 (14%)
Transactivation domain (Gln-rich) 350..499 29/175 (17%)
9aaTAD. /evidence=ECO:0000269|PubMed:31375868 461..469 2/7 (29%)
Repressor domain 534..620 11/92 (12%)
C2H2 Zn finger 623..645 CDD:275368 6/21 (29%)
COG5048 <636..718 CDD:227381 33/81 (41%)
zf-H2C2_2 637..664 CDD:290200 12/26 (46%)
C2H2 Zn finger 653..675 CDD:275368 8/21 (38%)
zf-H2C2_2 667..690 CDD:290200 12/22 (55%)
zf-C2H2 681..703 CDD:278523 12/21 (57%)
C2H2 Zn finger 683..703 CDD:275368 11/19 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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