Protein Alignment l(3)neo38 and sr

DIOPT Version :9

• Sequence 1: NP_001262485.1
• Gene: l(3)neo38 / 41423
• FlyBaseID: FBgn0265276
• Length: 455
• Species: Drosophila melanogaster
• Sequence 2: NP_001262693.1
• Gene: sr / 42162
• FlyBaseID: FBgn0003499
• Length: 1271
• Species: Drosophila melanogaster
• Alignment Length: 490
• Identity: 119/490 - (24%)
• Similarity: 161/490 - (32%)
• Gaps: 164/490 - (33%)

  Fly    16 QFAAKFDAQTPGAFGTPPAAAANAAAAAAAAGTDNHVQRYQTNGNHFNQ-------------NVP 67
            |.|:|...:  |.|.|...|...||||||||....|.|:.|    |..|             :.|
  Fly   711 QQASKISYR--GIFTTTGNAMNAAAAAAAAAAQQQHQQQQQ----HQQQLPSPQLGVLAGPMSPP 769

  Fly    68 NVSAANN------------------------MQYGQNISIPYSQPQG------------DLNFLN 96
            :.|..|:                        ||..|.......|.|.            |.....
  Fly   770 SNSLGNSWGLPSPDKTMFQPPLFSLPAHYATMQQQQQQQQQQQQQQQQQQAAGAAPSPYDDGRAA 834

  Fly    97 AAAAADHK-------------------------------GKIHPKIERDREEVLNQQILQNVNQS 130
            |||||.|.                               |.:|    ...|:.|.||........
  Fly   835 AAAAAQHAELLGLTMDCTPLLLKQPPPSYAGASAGFPGLGDLH----SSHEQQLQQQQYVRSQPK 895

  Fly   131 WQTLANTANTVDYSSHLLSATLPISIQHFLKYSETIKKESTGDVLKNGTNLAS---LALGGVALT 192
            :|.|.:.|   ||:.......   .:|...:..:|:       ||...|:.||   .|||  .|.
  Fly   896 YQWLDSPA---DYAQQQQQVQ---QVQQQQQQQQTL-------VLPGPTSSASSSNAALG--VLI 945

  Fly   193 PSNNGANGGHHNGLVGMDHGGHMTNMTDANGAALTNGASNGVNGNANGTVTNGGAGAVSSSGSVG 257
            |...                    |..|             :..::|||..:||:|..|::.:..
  Fly   946 PKQE--------------------NYPD-------------MQPSSNGTGYSGGSGGSSAAAAAA 977

  Fly   258 TTNASGGTGTASGKKTKKKKPPKEKKPRPKPGEIRETKALDGST--LYCCPECQMAYPDR-SLIE 319
            ...|:.....|            |..|....|....::....||  |...|.....||:| |...
  Fly   978 AAAAAAAVQLA------------EYSPSTSKGHEILSQVYQQSTVPLKLVPVKPRKYPNRPSKTP 1030

  Fly   320 QHVISHAVERRFVCDI--CNAALKRKDHLTRHKLSHIPDRPHVCNICMKSFKRKEQLTLHIVIHS 382
            .|      ||.:.|.:  |:....|.|.||||...|...:|..|.|||:||.|.:.||.||..|:
  Fly  1031 VH------ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHT 1089

  Fly   383 GEKKHVCIECGKGFYRKDHLRKHTRSHIARRVKSE 417
            |||...|..||:.|.|.|..::|.:.|:.:|:|.|
  Fly  1090 GEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKKE 1124

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(3)neo38	NP_001262485.1	C2H2 Zn finger	305..325	CDD:275368	6/20 (30%)
		zf-C2H2_8	306..391	CDD:292531	34/87 (39%)
		C2H2 Zn finger	333..353	CDD:275368	8/21 (38%)
		zf-H2C2_2	345..370	CDD:290200	12/24 (50%)
		C2H2 Zn finger	361..381	CDD:275368	11/19 (58%)
		zf-H2C2_2	374..398	CDD:290200	12/23 (52%)
		C2H2 Zn finger	389..409	CDD:275368	7/19 (37%)
sr	NP_001262693.1	zf-C2H2	1036..1060	CDD:278523	8/23 (35%)
		C2H2 Zn finger	1038..1060	CDD:275368	8/21 (38%)
		zf-H2C2_2	1052..1077	CDD:290200	12/24 (50%)
		C2H2 Zn finger	1068..1088	CDD:275368	11/19 (58%)
		zf-H2C2_2	1080..1105	CDD:290200	12/24 (50%)
		C2H2 Zn finger	1096..1116	CDD:275368	7/19 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23235
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100