DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)neo38 and sp7

DIOPT Version :9

Sequence 1:NP_001262485.1 Gene:l(3)neo38 / 41423 FlyBaseID:FBgn0265276 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_998028.1 Gene:sp7 / 405789 ZFINID:ZDB-GENE-040629-2 Length:440 Species:Danio rerio


Alignment Length:488 Identity:108/488 - (22%)
Similarity:159/488 - (32%) Gaps:146/488 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DAQTPGAFG-TPP---AAAANAAAAAAAAG-----TDNHVQRYQTNGNHFNQN---VPNVSAANN 74
            |:.|||..| |.|   |.:..:...:|..|     .|::...:.::|......   .|..:.|..
Zfish    35 DSATPGKPGSTIPIKKAYSMTSELQSAKNGRNESVADSYTGSFSSSGGLLTPTGSPPPAPTGAYG 99

  Fly    75 MQYGQNISIPYSQPQGDLNFLNAAAAAD------------------HKGKIHPKIERDREEVLNQ 121
            .:|....:...|....|.:.|.:.|.||                  :|| |||.|....      
Zfish   100 SEYNPFSTFQTSSVSQDPSLLGSKATADCLTSVNTYLDMTHPYGSWYKG-IHPGITASP------ 157

  Fly   122 QILQNVNQSW---QTLANTANTVDYSSHLLSATL-PISIQHFLKYSETIKKESTGDVLKNGTNLA 182
               .|...||   .|.||..:........|.|.| |::.|                        |
Zfish   158 ---ANATSSWWDVHTNANWLSPGQAQPDSLQAPLQPVAPQ------------------------A 195

  Fly   183 SLALGGVALTPSNNGANGGHHNGLVGMDHGGHM----TNMTDANGAALTNGASNGVNGNANGTVT 243
            ||.....:.||.....|...:.. ||:....|:    .:|...:........::|:..|:.|   
Zfish   196 SLNPQMPSYTPDFTPLNPAPYPS-VGLSSSSHLLQSSQHMLPQDMYKPKPVPTSGILDNSMG--- 256

  Fly   244 NGGAGAVSSSGSVGTTNASGGTGTASGKKTKKKKPPKEKKPRPKPGEIRETKALDGSTLYCCPEC 308
                           ..::.|:|.|:|..|                         |.:...||.|
Zfish   257 ---------------LKSARGSGYAAGSTT-------------------------GRSSCDCPNC 281

  Fly   309 Q----MAYPDRSLIEQHVISHAVERRFVCDI--CNAALKRKDHLTRHKLSHIPDRPHVCN--ICM 365
            |    :.....||.::.|.|        |.|  |.....:..||..|...|..:||.|||  .|.
Zfish   282 QELERLGASAASLRKKPVHS--------CHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCG 338

  Fly   366 KSFKRKEQLTLHIVIHSGEKKHVCIECGKGFYRKDHLRKHTRSHIAR--------RVKSEVSAQN 422
            |.|.|.::|..|:..|:.|||..|:.|.|.|.|.|||.||.::|...        ..::|.|:.:
Zfish   339 KRFTRSDELERHVRTHTREKKFTCLLCNKRFTRSDHLSKHQKTHSEASLQGKEEPETRAEESSAD 403

  Fly   423 VNGSAGGGGG------GGGGNSAQSNALHGSXG 449
            ....||...|      ||...|:..|.:....|
Zfish   404 KVAPAGSEIGIQEPAVGGEEKSSTGNGVDSGSG 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)neo38NP_001262485.1 C2H2 Zn finger 305..325 CDD:275368 7/23 (30%)
zf-C2H2_8 306..391 CDD:292531 30/92 (33%)
C2H2 Zn finger 333..353 CDD:275368 6/21 (29%)
zf-H2C2_2 345..370 CDD:290200 12/26 (46%)
C2H2 Zn finger 361..381 CDD:275368 8/21 (38%)
zf-H2C2_2 374..398 CDD:290200 10/23 (43%)
C2H2 Zn finger 389..409 CDD:275368 10/19 (53%)
sp7NP_998028.1 zf-C2H2 300..324 CDD:278523 7/31 (23%)
zf-C2H2_8 302..386 CDD:292531 33/83 (40%)
C2H2 Zn finger 305..324 CDD:275368 4/18 (22%)
zf-H2C2_2 316..343 CDD:290200 12/26 (46%)
C2H2 Zn finger 332..354 CDD:275368 8/21 (38%)
zf-H2C2_2 346..371 CDD:290200 10/24 (42%)
C2H2 Zn finger 362..382 CDD:275368 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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