DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)neo38 and SP5

DIOPT Version :9

Sequence 1:NP_001262485.1 Gene:l(3)neo38 / 41423 FlyBaseID:FBgn0265276 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_011509461.1 Gene:SP5 / 389058 HGNCID:14529 Length:454 Species:Homo sapiens


Alignment Length:201 Identity:60/201 - (29%)
Similarity:89/201 - (44%) Gaps:30/201 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 GVNGNANGTVTNGGAGAVSSSGSVGTTNASGGTGTASGKKTKK---KKPPKEKKPRPKPGEIRET 294
            |....|:|...:|.:||.:.:.......||.....|:....::   ..|....:.:.:...:.:|
Human   252 GAGPGASGVPGSGLSGACAGAPHAPRFPASAAAAAAAAAALQRGLVLGPSDFAQYQSQIAALLQT 316

  Fly   295 KA-LDGSTLYC----CPECQM------AYPDRSLIEQHVISHAVERRFVCDI--CNAALKRKDHL 346
            || |..:...|    ||.||.      |.|.:.  :||          ||.:  |.....:..||
Human   317 KAPLAATARRCRRCRCPNCQAAGGAPEAEPGKK--KQH----------VCHVPGCGKVYGKTSHL 369

  Fly   347 TRHKLSHIPDRPHVCN--ICMKSFKRKEQLTLHIVIHSGEKKHVCIECGKGFYRKDHLRKHTRSH 409
            ..|...|..:||.|||  .|.|||.|.::|..|:..|:|||:..|.||||.|.|.|||.||.::|
Human   370 KAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTH 434

  Fly   410 IARRVK 415
            ..:::|
Human   435 QNKKLK 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)neo38NP_001262485.1 C2H2 Zn finger 305..325 CDD:275368 8/25 (32%)
zf-C2H2_8 306..391 CDD:292531 31/94 (33%)
C2H2 Zn finger 333..353 CDD:275368 5/21 (24%)
zf-H2C2_2 345..370 CDD:290200 13/26 (50%)
C2H2 Zn finger 361..381 CDD:275368 9/21 (43%)
zf-H2C2_2 374..398 CDD:290200 12/23 (52%)
C2H2 Zn finger 389..409 CDD:275368 12/19 (63%)
SP5XP_011509461.1 C2H2 Zn finger 357..376 CDD:275368 4/18 (22%)
COG5048 <367..440 CDD:227381 33/72 (46%)
zf-H2C2_2 368..395 CDD:290200 13/26 (50%)
C2H2 Zn finger 384..406 CDD:275368 9/21 (43%)
zf-H2C2_2 398..421 CDD:290200 11/22 (50%)
zf-C2H2 412..434 CDD:278523 12/21 (57%)
C2H2 Zn finger 414..434 CDD:275368 12/19 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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