DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)neo38 and SP5

DIOPT Version :10

Sequence 1:NP_001262485.1 Gene:l(3)neo38 / 41423 FlyBaseID:FBgn0265276 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_005246599.1 Gene:SP5 / 389058 HGNCID:14529 Length:442 Species:Homo sapiens


Alignment Length:201 Identity:60/201 - (29%)
Similarity:89/201 - (44%) Gaps:30/201 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 GVNGNANGTVTNGGAGAVSSSGSVGTTNASGGTGTASGKKTKK---KKPPKEKKPRPKPGEIRET 294
            |....|:|...:|.:||.:.:.......||.....|:....::   ..|....:.:.:...:.:|
Human   240 GAGPGASGVPGSGLSGACAGAPHAPRFPASAAAAAAAAAALQRGLVLGPSDFAQYQSQIAALLQT 304

  Fly   295 KA-LDGSTLYC----CPECQM------AYPDRSLIEQHVISHAVERRFVCDI--CNAALKRKDHL 346
            || |..:...|    ||.||.      |.|.:.  :||          ||.:  |.....:..||
Human   305 KAPLAATARRCRRCRCPNCQAAGGAPEAEPGKK--KQH----------VCHVPGCGKVYGKTSHL 357

  Fly   347 TRHKLSHIPDRPHVCN--ICMKSFKRKEQLTLHIVIHSGEKKHVCIECGKGFYRKDHLRKHTRSH 409
            ..|...|..:||.|||  .|.|||.|.::|..|:..|:|||:..|.||||.|.|.|||.||.::|
Human   358 KAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTH 422

  Fly   410 IARRVK 415
            ..:::|
Human   423 QNKKLK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)neo38NP_001262485.1 C2H2 Zn finger 305..325 CDD:275368 8/25 (32%)
C2H2 Zn finger 333..353 CDD:275368 5/21 (24%)
COG5048 341..>455 CDD:227381 34/77 (44%)
C2H2 Zn finger 361..381 CDD:275368 9/21 (43%)
C2H2 Zn finger 389..409 CDD:275368 12/19 (63%)
SP5XP_005246599.1 PHA03247 <19..267 CDD:223021 6/26 (23%)
SP5_N 150..341 CDD:412096 23/112 (21%)
C2H2 Zn finger 345..364 CDD:275368 4/18 (22%)
COG5048 <355..428 CDD:227381 33/72 (46%)
C2H2 Zn finger 372..394 CDD:275368 9/21 (43%)
zf-H2C2_2 386..409 CDD:463886 11/22 (50%)
C2H2 Zn finger 402..422 CDD:275368 12/19 (63%)

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