DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)neo38 and Klf9

DIOPT Version :10

Sequence 1:NP_001262485.1 Gene:l(3)neo38 / 41423 FlyBaseID:FBgn0265276 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_476559.2 Gene:Klf9 / 117560 RGDID:70934 Length:244 Species:Rattus norvegicus


Alignment Length:101 Identity:40/101 - (39%)
Similarity:49/101 - (48%) Gaps:7/101 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 SLIEQHVIS---HAVERRFVCDI--CNAALKRKDHLTRHKLSHIPDRPHVCN--ICMKSFKRKEQ 373
            ||:...|.|   ||.|:|..|..  |.....:..||..|...|..:||..|.  .|:|.|.|.::
  Rat   125 SLLHSGVASKGKHASEKRHKCPYSGCGKVYGKSSHLKAHYRVHTGERPFPCTWPDCLKKFSRSDE 189

  Fly   374 LTLHIVIHSGEKKHVCIECGKGFYRKDHLRKHTRSH 409
            ||.|...|:|||:..|..|.|.|.|.|||.||.|.|
  Rat   190 LTRHYRTHTGEKQFRCPLCEKRFMRSDHLTKHARRH 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)neo38NP_001262485.1 C2H2 Zn finger 305..325 CDD:275368 4/11 (36%)
C2H2 Zn finger 333..353 CDD:275368 5/21 (24%)
COG5048 341..>455 CDD:227381 30/71 (42%)
C2H2 Zn finger 361..381 CDD:275368 8/21 (38%)
C2H2 Zn finger 389..409 CDD:275368 11/19 (58%)
Klf9NP_476559.2 KLF9_N 3..144 CDD:409239 8/18 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..51
COG5048 <78..234 CDD:227381 40/101 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..143 7/17 (41%)
C2H2 Zn finger 145..167 CDD:275368 5/21 (24%)
C2H2 Zn finger 175..197 CDD:275368 8/21 (38%)
C2H2 Zn finger 205..225 CDD:275368 11/19 (58%)
Blue background indicates that the domain is not in the aligned region.

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