DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and AT1G04790

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_563717.1 Gene:AT1G04790 / 839412 AraportID:AT1G04790 Length:634 Species:Arabidopsis thaliana


Alignment Length:665 Identity:129/665 - (19%)
Similarity:209/665 - (31%) Gaps:226/665 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   734 PPPPMPPILLPDNSSTEAYLRHQQRNLTSTPSSSSSEQTSTQQSRHRRSSPANVYHRYHPYYYAI 798
            |..|:.|:..........:|..:.|.:.....:..|..|.|:.....|:|..|...|        
plant    28 PHSPVAPLRYQREEYRNHHLHGRARPVPEIGDNRESSDTRTESGHRPRASVGNALFR-------- 84

  Fly   799 TTLPTVVESDYPPSLQPHP------------------HPH------------------------- 820
               .||||.|...|:...|                  |.|                         
plant    85 ---RTVVEKDKGKSISTDPCAPRVEKNPVLNLNQRNGHVHVAASRYQPSEDIRELRTSNGCSPLR 146

  Fly   821 ------------------------PHFQ--------PSQGGSSRSSLSGALNAAAVAATA--AA- 850
                                    ||.:        |...|:.|....|.::...:||.|  || 
plant   147 GDHNSFVLPGNSNKGKEKADSGSVPHRETIDLSSGKPQNRGTKRLVRHGCISPHEIAARARQAAD 211

  Fly   851 ------------VQAQTFS-----DLLSQAHNEGRAA---------------ALEGNRTPPHTMV 883
                        :.::|.|     :::.::...|||.               .|||..:..:..:
plant   212 TNSYDTLSVEQELASETASSIGIREIVPESDIHGRARGKRPEISSSRVASRDGLEGWVSTRNRNL 276

  Fly   884 HAQHQQRQSINPPAPGVASNANLAAAVSPPPPLEMYS--------GRSTIPHCGSPPFSVRRSEA 940
            :.:|:..........|:.|:.. ...|.....:|..|        |.:|......|..:|.||..
plant   277 NMEHEMNHRDESNTRGICSSVT-RLDVRETGVVERESRQQRRRKNGFTTSTASNEPEVTVNRSSG 340

  Fly   941 AYSNRQHYQPQPHQGH-----------QAPQNQMHAHIHPPHR--------------ASAIVATS 980
            ..|:.:..:.|.|..|           .:|:.::   ...|.|              |..|:|..
plant   341 EPSSSRPPRIQNHLRHWHGTQVLEIEDSSPEVRV---FRGPRRVENDVSDVNIRQIEADEILARE 402

  Fly   981 LTPAPPYPVHQNLWYRQQSM------QEMHRRHMTPTPIDL-SSNAPLLTSTLRNGYLHSICSCV 1038
            |         |...||::|:      .|:..|.|......| :|::...|...|:.  ::|.:..
plant   403 L---------QEQLYREESLIRHEQIDEIIARSMEQEENSLRASSSRASTRITRSS--NTIAANP 456

  Fly  1039 HARNGPVSSLDP-----AYYPPYDAAPAAAAPPPSPQQQSPATSGSGNSSVAAQASMR------- 1091
            ..|:...:.|..     .:.||...||..|          || .|.|.....|.||:|       
plant   457 RGRSRLEARLQQHSSRRRFNPPQARAPVRA----------PA-RGRGYRLGGASASLRTALNFSF 510

  Fly  1092 --HLQLQPQQQPQAQQSPPVMQHMQRQRAIHHHMFHHHYSPLHLEIGLAPLSLGSRILIAPSRPN 1154
              .:.|..:..        :::.:  :.||.|.:...:.  ||::........  .:|:|....|
plant   511 PIDMGLDSRMD--------ILEEL--ENAIGHSITSSNL--LHMDRDFTEDDY--ELLLALDENN 561

  Fly  1155 R---GATLETIERNTLPHKYRRVRRPSETDEDAEKCAICLNLFEIENEVRRLPCMHLFHTDCVDQ 1216
            .   ||:...|  |.||..      ..:||...|.|.|||...:|.:.:|.|||:|.||.||:|.
plant   562 HRHGGASANRI--NNLPES------TVQTDNFQETCVICLETPKIGDTIRHLPCLHKFHKDCIDP 618

  Fly  1217 WLVTNKHCPICRVDI 1231
            ||..:|.||:|:..:
plant   619 WLGRSKSCPVCKSSV 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448 21/42 (50%)
zf-RING_2 1187..1228 CDD:290367 20/40 (50%)
AT1G04790NP_563717.1 RILP-like <391..431 CDD:304877 11/48 (23%)
zf-RING_2 587..630 CDD:290367 21/42 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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