DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and AT1G26800

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_564263.1 Gene:AT1G26800 / 839223 AraportID:AT1G26800 Length:204 Species:Arabidopsis thaliana


Alignment Length:60 Identity:23/60 - (38%)
Similarity:34/60 - (56%) Gaps:4/60 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly  1179 ETDEDAEKCAICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPND 1238
            |.|....:|.|||..::.|..|:.:||.|.||..|:::||..:..||:||.:    ||.|
plant   105 EIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYE----MPVD 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448 16/42 (38%)
zf-RING_2 1187..1228 CDD:290367 16/40 (40%)
AT1G26800NP_564263.1 RING_Ubox 112..157 CDD:418438 18/48 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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