DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and AT1G18760

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_173311.1 Gene:AT1G18760 / 838458 AraportID:AT1G18760 Length:224 Species:Arabidopsis thaliana


Alignment Length:65 Identity:26/65 - (40%)
Similarity:33/65 - (50%) Gaps:7/65 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1165 NTLPHK-YRRVRRPSETDEDAEKCAICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICR 1228
            |:|..| |::      |....|:|.|||..|....:|..|||.|.|..:||..|..||..||:||
plant   158 NSLARKIYKK------TTSSTERCTICLEEFNDGTKVMTLPCGHEFDDECVLTWFETNHDCPLCR 216

  Fly  1229  1228
            plant   217  216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448 19/42 (45%)
zf-RING_2 1187..1228 CDD:290367 18/40 (45%)
AT1G18760NP_173311.1 RING_Ubox 173..217 CDD:418438 21/44 (48%)
RING-H2 finger (C3H2C3-type) 175..215 CDD:319361 18/39 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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