DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6923 and AT5G37270

DIOPT Version :10

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_198543.1 Gene:AT5G37270 / 833701 AraportID:AT5G37270 Length:208 Species:Arabidopsis thaliana


Alignment Length:90 Identity:28/90 - (31%)
Similarity:43/90 - (47%) Gaps:12/90 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1144 SRILIAPS--RPNRGATLETIERNTLPHKYRRVRRPSETDEDAEKCAICLNLF--EIENEVRRLP 1204
            :|.::.||  .|:|......:|..|:..       ....||:...|:|||..|  ..::.:..||
plant   115 TRDVMLPSIAVPSRDMFQRLLEEQTMEF-------TDLGDEEETTCSICLEDFSESHDDNIILLP 172

  Fly  1205 -CMHLFHTDCVDQWLVTNKHCPICR 1228
             |.||||..|:.:||...:.||:||
plant   173 DCFHLFHQSCIFEWLKRQRSCPLCR 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 HRD1 <1155..>1256 CDD:227568 24/77 (31%)
RING-H2_RNF111-like 1185..1230 CDD:438137 19/47 (40%)
AT5G37270NP_198543.1 RING-H2_PA-TM-RING 152..197 CDD:438118 17/44 (39%)

Return to query results.
Submit another query.