DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and AT3G60080

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_191567.1 Gene:AT3G60080 / 825178 AraportID:AT3G60080 Length:306 Species:Arabidopsis thaliana


Alignment Length:59 Identity:24/59 - (40%)
Similarity:34/59 - (57%) Gaps:3/59 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1178 SETDEDAEK---CAICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIET 1233
            |..|.|.:.   ||:|...|.|....|||||.|::|:||:..||..:..||:||.::.|
plant   157 STDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFELPT 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448 18/45 (40%)
zf-RING_2 1187..1228 CDD:290367 18/40 (45%)
AT3G60080NP_191567.1 zinc_ribbon_9 18..57 CDD:405118
RING-H2_RNF126_like 169..210 CDD:319581 18/40 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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