DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and AT3G30460

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_189667.2 Gene:AT3G30460 / 822758 AraportID:AT3G30460 Length:183 Species:Arabidopsis thaliana


Alignment Length:175 Identity:39/175 - (22%)
Similarity:57/175 - (32%) Gaps:76/175 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly  1124 FHHHYSP------------LHLEIGLAPLSLGSRILIAPSRPNRGATLETIERNT--LPHKYRR- 1173
            ::||..|            .||     ||:|        :.|::..|.|..|.:|  :..:|.| 
plant    22 YNHHLHPKRKRKKKSMAEEFHL-----PLNL--------TEPDQTPTEEDFEADTTLIDDEYLRY 73

  Fly  1174 -----------VRRPSETDE---------------------------DAEK--------CAICLN 1192
                       |......||                           .||:        ||||..
plant    74 LHYLDSRSNHGVNTFGSYDEIFGLVLGNSSSCTRWLNAGEELPVVEFTAEEMMERGLVVCAICRE 138

  Fly  1193 LFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPN 1237
            .......:..|||.|.:|.:|:..||.....||:||.::|  :||
plant   139 ELAANERLSELPCRHYYHKECISNWLSNRNTCPLCRHNVE--LPN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448 15/50 (30%)
zf-RING_2 1187..1228 CDD:290367 14/40 (35%)
AT3G30460NP_189667.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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