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Protein Alignment CG6923 and RHC1A
DIOPT Version :9
Sequence 1: | NP_001262484.1 |
Gene: | CG6923 / 41420 |
FlyBaseID: | FBgn0037944 |
Length: | 1265 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001324188.1 |
Gene: | RHC1A / 818680 |
AraportID: | AT2G40830 |
Length: | 328 |
Species: | Arabidopsis thaliana |
Alignment Length: | 81 |
Identity: | 26/81 - (32%) |
Similarity: | 47/81 - (58%) |
Gaps: | 15/81 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 1172 RRVRRPSETDEDAEKCAICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMP 1236
:|..|.|::: |.:|.:.||:.:|.:::||.|::|:||:..|||.:..||:||.::
plant 180 QRHLRSSDSN-----CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL----- 234
Fly 1237 NDALPPSSSGVPDAAN 1252
||:||...:.|
plant 235 -----PSASGPSSSQN 245
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1249953at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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