DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and rnf115a

DIOPT Version :10

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:XP_073781419.1 Gene:rnf115a / 790928 ZFINID:ZDB-GENE-061215-82 Length:350 Species:Danio rerio


Alignment Length:104 Identity:29/104 - (27%)
Similarity:47/104 - (45%) Gaps:16/104 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1150 PSRPNRGATLETIERNTLPHKYRRVRRPSETDEDAEKCAICLNLFEIENEVRRLPCMHLFHTDCV 1214
            |:...:.::|.|:           :.....||.:.| |.:|...:.:...||:|||.|.||:||:
Zfish   253 PAEKEKISSLPTV-----------IITQEHTDCNME-CPVCKEDYTVGEPVRQLPCNHFFHSDCI 305

  Fly  1215 DQWLVTNKHCPICRVDIETHMPNDALPPSSSGVPDAANS 1253
            ..||..:..||:||..:.    .|.....||..|.:.|:
Zfish   306 VPWLELHDTCPVCRKSLN----GDESGTQSSSEPSSLNT 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 HRD1 <1155..>1256 CDD:227568 28/99 (28%)
RING-H2_RNF111-like 1185..1230 CDD:438137 19/44 (43%)
rnf115aXP_073781419.1 None

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