DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and pja2

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:XP_009300150.1 Gene:pja2 / 565118 ZFINID:ZDB-GENE-060526-337 Length:661 Species:Danio rerio


Alignment Length:577 Identity:108/577 - (18%)
Similarity:190/577 - (32%) Gaps:149/577 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RREESSGFEGLARRCDKCSSLDGLCRCESMVASSSRYADSTQNQSH--SEAQFLEQPSSSTAAI- 140
            ||.....|:....:....|::|    |::|..:|.:.:.:.:::.:  |..|.: .|.|.|.:: 
Zfish    27 RRHAYISFKPFTDKQRATSTVD----CQNMQRTSDQKSQAMESKGNISSVLQTI-LPISCTNSVR 86

  Fly   141 ------ANPPAVHS--------IP--------RPKRKKTEPLTMEPESDNDGDAVVASVSGTWPA 183
                  |:.|..|:        :|        |||..:..|...:..|..:...|       ||.
Zfish    87 PEINAAAHHPEGHNRRHSSLRRVPKAPLNHFKRPKNDQVVPYDRKHCSGREKSKV-------WPI 144

  Fly   184 GAIEEHAMDSTAV------VYEVPSSSLQLSNSSFETAPSAVNAYDDV------TSSASDTEHGQ 236
            .  |.|..:|.|:      .||..||..:..:.|.:.:.:|....|.:      ..|..|:....
Zfish   145 D--ENHKTNSKALSYINIDAYEPDSSGAEEEDLSSDPSHAACRRLDGICELGGNVDSLDDSRSSL 207

  Fly   237 FAHTRTTNTTTTTSAVQAHKKKASRSNNASNTSSRAVDTDATPSTSAQSRKRQMSQFSYRKSRVL 301
            |...|...        .|..|.::...:.:....|.|.|:..||...:....:.  :....|.|.
Zfish   208 FRKNRMKQ--------MASSKDSTDLFDDTPDCQRTVKTNGKPSFFLEDGAPKC--YGDTASAVS 262

  Fly   302 EPENESSDDGWDLRVHNPVPP---IEPTVTIIRGSRGSDEAEIGHTDHNYYNSRCAVAGAPPDST 363
            ....|.::.|........|.|   .:.:.|.:...:.|::.|.||...:...::|  ..|||.  
Zfish   263 HKNTEQNNPGETFESEMVVRPKIRKQTSETHLERRKRSEKEETGHLSGSAIRNKC--GSAPPG-- 323

  Fly   364 YIRSASCSTATHTTRSVDYGSRIGRRSAATGSPSTSSDQEQEQQQ-RQQQEEIIHEERRHQQSPG 427
             ..:.:|..          ...:....|...|...|.|::.|.:. :.:.|:.|.|:..:.....
Zfish   324 -FLAQTCPE----------NKFLFNFPAMALSDLNSEDRKSEDENAKVEDEDDIWEDLENFGEKC 377

  Fly   428 QPMHSMYGVPGESRMS---WSRARPSDDSVPPRKHARMELPGRSRSKLSSTNFNSFYPGRRGHRT 489
            :|  ||......|..|   ||.:..||.             |..:.:.:|.......||      
Zfish   378 EP--SMKADESSSEFSEGEWSASWTSDS-------------GLDKERCTSEESWETLPG------ 421

  Fly   490 FAEQGNSSGQHHVRFPPSSTPNSNGPCVITYVGRPRDSQPAADLNLPSTSTGRRGSHETRADSVV 554
                        :..||:|..:|            .:..|:.:|.|...:....|.         
Zfish   422 ------------IDEPPASRSSS------------LEEVPSLNLALEEQTPLEEGE--------- 453

  Fly   555 LTAPDLQL--DDWSSDDDDDDVV--FVHSTREPILSIDLTSDDDGLANDTQLQRDRD 607
              .|.|..  |..||.|:|.|.|  |||.      .:.:...::.|.:|:.:..|.|
Zfish   454 --IPWLMYNEDSGSSSDEDPDGVSQFVHP------GLFILDGNNNLEDDSSMSEDLD 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448
zf-RING_2 1187..1228 CDD:290367
pja2XP_009300150.1 zf-RING_2 588..629 CDD:290367
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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