DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6923 and si:ch211-59o9.10

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_001352283.1 Gene:si:ch211-59o9.10 / 561841 ZFINID:ZDB-GENE-101206-1 Length:474 Species:Danio rerio


Alignment Length:604 Identity:110/604 - (18%)
Similarity:188/604 - (31%) Gaps:207/604 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   674 ALADRAAISDHNYSYELDQLMDPGPGNFYPPRCSNMDPQRYFLPINESSMWMPGHPAPPPPPPPM 738
            :|.:...::|.:|.:|     :||..:.:...|                        .|..|.|:
Zfish    25 SLNNACLLNDSDYLFE-----EPGLSHDFSSTC------------------------VPETPSPL 60

  Fly   739 PPILLPDNSSTEAYLRHQQRNLTSTPSSSS------------------SEQTSTQQSRHRRSSPA 785
                      .....||.|::...|.::||                  :..:|.:..:.|:....
Zfish    61 ----------IHRRKRHSQKDEDKTVATSSCSYGRKWERQDLIPGYLNTTPSSQRLMKRRKLENL 115

  Fly   786 NVYH-----RYHPYYYAITTLPTVVESDYPPSLQPHPHPHPHFQPSQGGSSRSSLSGALNAAAVA 845
            |..|     :.:.:..|.:.|||    |:.....|.|             ..||.|...:::|.:
Zfish   116 NTTHSTVTPQTNGFVSASSLLPT----DFTWLESPRP-------------LASSASSKPSSSAGS 163

  Fly   846 ATAAAVQAQTFSDLLSQAHNEGRAAALEGNRTPPHTMVHAQHQQRQSINPPAPGVASNANLAAAV 910
            ||.|..|....:.|..|         ||..|.....:::::.|:|:.....| ..:|:|:..|..
Zfish   164 ATCALDQTADLTSLNEQ---------LETGRASMQKIINSREQRRKKTRTKA-SKSSSAHSTAPT 218

  Fly   911 SPPPPLEMYSGRSTIPHCGSPPF---------------------SVRRSE-AAYSNRQHYQPQPH 953
            .....|.:.|.:.......||.|                     ||:.:| .||:  :..|.|..
Zfish   219 IEDEALLLDSAKRMHGPASSPSFLIPDDVVIIEDDAADDVMVVRSVQMAEDEAYA--RSLQEQFD 281

  Fly   954 QGHQAPQNQMHAHIHPPHRASAIVATSLTPAPPYPVHQNLWYRQQSMQEMHRRHMTPTPIDLSSN 1018
            ...:..|.|                                 ||.|:...:..|:..:.:.|...
Zfish   282 MEERIEQQQ---------------------------------RQSSINNHNHNHVVDSYVGLGWI 313

  Fly  1019 APLLTSTLRNGYLHSICSCVHARNGPVSSLDPAYYPPYDAAPAAAAPPPSPQQQSPATSGSGNSS 1083
            .|..:....:.:.|:        ...:|.|....:          ...|..||....|   |.:.
Zfish   314 PPWASMISSSSFTHT--------PSELSELQQVIF----------GEQPHRQQGRRQT---GRTR 357

  Fly  1084 VAAQASMRHLQLQPQQQPQAQQSPPVMQHMQRQRAIHHHMFHHHYSPLHLEIGLAPLSLGSRILI 1148
            .:.:....|||:......|......::...::|.|:                            :
Zfish   358 ASRRRPAAHLQMDLFNDSQGNNYEALLAFEEQQGAV----------------------------M 394

  Fly  1149 APSRPNRGATLETIERNTLPHK-YRRVRRPSETDEDAEKCAICLNLFEIENEVRRLPCMHLFHTD 1212
            |.:      ||...|...||.| |.......:||     |.||.:.::....:|.|||:|.:|..
Zfish   395 AKN------TLSKAEIERLPIKTYDPTHSAGKTD-----CQICFSEYKAGERLRMLPCLHDYHVK 448

  Fly  1213 CVDQWLVTNKHCPICRVDI 1231
            |:|:||..|..|||||.|:
Zfish   449 CIDRWLKENATCPICRADV 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448 17/42 (40%)
zf-RING_2 1187..1228 CDD:290367 17/40 (43%)
si:ch211-59o9.10NP_001352283.1 RING_Ubox 423..464 CDD:327409 17/40 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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