DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and rnf126

DIOPT Version :10

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:XP_031753815.1 Gene:rnf126 / 448402 XenbaseID:XB-GENE-5960892 Length:337 Species:Xenopus tropicalis


Alignment Length:219 Identity:51/219 - (23%)
Similarity:85/219 - (38%) Gaps:45/219 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1076 TSG------SGNSSVAAQASMRHLQLQPQQQPQAQQSPPVMQHMQRQRAIHHHMFHHHYSPLHL- 1133
            |||      .|.|....|:..|:...||:.:...:::....:.:.....|...:.:...:|..: 
 Frog   122 TSGPVEEPRDGESRREHQSRQRYGARQPRARLSTRRAAGRNEGVPTLEGIIQQLVNGIIAPTAMS 186

  Fly  1134 EIGLAPLSLGSRILIAPSRPNR---GAT-LETIERNTLPHKYRRVRRPSETDE------------ 1182
            .:|:.|..      :..|.|..   ||. |:||....|.........|::|::            
 Frog   187 NLGVGPWG------VLHSNPMDYAWGANGLDTIITQLLNQFENTGPPPADTEKIQALPTIQITEE 245

  Fly  1183 ---DAEKCAICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIE-----THMP--- 1236
               ...:|.:|...:.:...||:|||.||||.||:..||..:..||:||..:.     |:.|   
 Frog   246 HVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNPPGLT 310

  Fly  1237 -----NDALPPSSSGVPDAANSAA 1255
                 :.:...|||..|...|:||
 Frog   311 EMTFSSSSTSSSSSTSPTDENNAA 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 HRD1 <1155..>1256 CDD:227568 36/133 (27%)
RING-H2_RNF111-like 1185..1230 CDD:438137 19/44 (43%)
rnf126XP_031753815.1 zinc_ribbon_9 36..66 CDD:433910
RING-H2_RNF126 252..295 CDD:438453 18/42 (43%)
Blue background indicates that the domain is not in the aligned region.

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