DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and mura

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster


Alignment Length:1239 Identity:252/1239 - (20%)
Similarity:392/1239 - (31%) Gaps:449/1239 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 SRSNNASNTSSRAVDTDATPSTSAQSRKRQMSQFSYRKSRVLEPENESSDDG------------- 311
            |.:||::|.:::    ||.|:...|: ........|..|:.....|.|:::|             
  Fly   113 SSNNNSNNVNNK----DANPNCDVQT-SNSSGTCIYNNSKAHHHHNNSNNNGHTQSHIHTNHSLH 172

  Fly   312 ------WDLRVHNPVPPIE------------PTVTIIRGSRGSDEAEIGHTDHNYYNSRCAVAGA 358
                  ...::|.|..|..            |..:....|..|:    |||:.|..|:..:....
  Fly   173 QGHHHPHHTQMHTPHYPHSSSPQQSNSYRQYPPHSYSPNSPHSN----GHTNSNASNNPISQRSN 233

  Fly   359 P-------PDSTYIRSASCSTATHT---------------------------TRSVDYGSRIGRR 389
            |       .:|.:....:.|..:||                           .|.|.:|.|....
  Fly   234 PQAHPNQNQNSNFYEMCTGSGGSHTYGSMSVSLVRLNPARLCLTLGPVTPPAQRVVSFGHRSHSH 298

  Fly   390 SAATGSPSTSSDQEQ--------------EQQQRQQQEEIIHEERRHQQSPGQPMHSMYGVPGES 440
            |.:: |.::||||.|              ...|.|.|.:..:..:.|......|:||        
  Fly   299 SNSS-SNTSSSDQNQHNPPPRSQNHHPNPHHSQYQYQYQYQYRYQYHPPHQYHPLHS-------- 354

  Fly   441 RMSWSRARPSDDSVPPRKHARMELP-GRSRS-KLSSTNFNSFYPGRRGHRTFAEQGNSSGQHHVR 503
                          |.::..|..|| .|:.| .:::|.|||..|....:.|.....||. ...:.
  Fly   355 --------------PQQQTNRQSLPLTRTNSNSINATTFNSTNPTTNSNPTDVVNVNSC-TDIIP 404

  Fly   504 FPPSSTPNSNGPCVITYVGRPRDSQ-----PAADLNLPSTSTG---------------RRGSHET 548
            :..|||.:|....:      |:..|     .:|.:|..|...|               ..|::..
  Fly   405 YGSSSTSSSASSML------PQQQQHQINNASAPINSHSQGQGPGNSPNLGHNHQRGYNNGNNNR 463

  Fly   549 RADSVVLTA-----PD----------LQLDDWSSDDDDDDVVFVHSTREPILSIDL---TSDDDG 595
            ...:.::..     ||          .|..|:|.:.:.::....|:.|. .:|.:|   :|..:|
  Fly   464 GIGNGIVNGNTNGPPDYMNYRRGVCPAQSRDYSGNGNGNNNGHGHNGRR-YMSDNLNNPSSSMNG 527

  Fly   596 LANDTQLQRDRDRGRERERERARDREPYRNDTQPNPEDPNEDRRTMYDCAYTF----------PY 650
            |.|.         |..:.....|:...:..:::.|....:.||..  ..:|.|          .|
  Fly   528 LINS---------GHHQRNYNDRNLNNHFGNSEQNGGPDHRDRAE--GSSYNFMRNGGGSGGGGY 581

  Fly   651 AR---RTDRRTEANNEGTSAFA---FYSGALADRAAISDHNYSYELDQLMDPGPGNFYPPRCSNM 709
            .|   ........||.|.|...   ...|.|...:.:|..:.|      ::.|||..      |.
  Fly   582 GRNGSHYQHMAYGNNNGASTSTGGPGLMGELPSGSGLSGSSLS------LNNGPGGL------NS 634

  Fly   710 D-PQRYFLPINESSMWMPGHPAPPPPPP---PM-------PPILLPDNSSTEAYLRHQQRNLTST 763
            | |.|....|:       |.|...|.|.   ||       ||:..|           :.|::.: 
  Fly   635 DSPSRKRRRIS-------GRPPNGPQPQHRCPMAHMQQGSPPLRRP-----------RLRDVAT- 680

  Fly   764 PSSSSSEQTSTQQSRH----RRSSPANVYHRYHPYYYAITTLPTVVESDYPPSLQPHPH------ 818
             |:...:|....|..|    ::..|:|    |||.::.                ||.||      
  Fly   681 -STQQQQQQYGHQVHHPQQQQQQPPSN----YHPMHHH----------------QPQPHYVPQQQ 724

  Fly   819 -PHPHFQ--PSQGGSSRSSLSGALNAAAVAATAAAVQAQTFSDLLSQAHNEGRAAALEGNRTPPH 880
             |.||.|  |...|||..|..||.::::|......|||                        ||.
  Fly   725 VPPPHVQRSPWDLGSSGGSSGGATSSSSVGPILQQVQA------------------------PPQ 765

  Fly   881 TMVHAQHQQRQSINPPAPGVASNANLAAAVSPPPP--LEMYSGRSTIPHCGSPPFSVRRSEAAYS 943
            ...|     :|::..|.             :||.|  |.:....:.:|    ....:|.||..::
  Fly   766 PPSH-----QQAVGYPQ-------------APPQPASLMVDLNLNQVP----VNLQLRPSEPFWA 808

  Fly   944 NRQHYQPQPHQGHQAPQNQMHAHIHPPHRASAIVATSLTPAPPYP---------VHQNLWYRQQS 999
            :...| |.|.|...||     .|:|.       |.|...||.|.|         .||.|...||.
  Fly   809 SFCTY-PIPAQARLAP-----CHLHG-------VYTQPFPAAPPPGLAAPPLQQQHQPLIQAQQM 860

  Fly  1000 MQEMHRRHMTPTPIDLSSNAPLLTSTLRNGYLHSICSCVHARNGPVSSLDPAYYPPYDAAPAAAA 1064
            :.:                 ..||:..:.   ..:.:...|..||:.            ||.|..
  Fly   861 ISQ-----------------ATLTAQQQQ---RDVVAIATANLGPIE------------APGAHG 893

  Fly  1065 PP-------PSPQQQSPATSGSGNSSVAAQASMRHL--------------QLQPQQQ----PQAQ 1104
            .|       |...|..|....:..|..||.|:..||              |:...||    ...:
  Fly   894 HPHAHPHAHPHAHQLPPGIHITPLSGAAAAAATHHLHSTAAAAAAVAAGAQITTAQQILFSSDRR 958

  Fly  1105 QSPPVMQHMQRQRAIHHHMFHH---------HYSPLHLE-----------------IGLAP---- 1139
            ..||..:..:...|.|.|  .|         |.:|:.::                 ..|:|    
  Fly   959 TFPPHRRIPRFWTANHGH--RHVLPPQSLAAHQAPVQIQATSGIINPGFLLNFLAMFPLSPYNQH 1021

  Fly  1140 ----------------LSLGSRILIAPSRPNRGATLETIERNTLP-HKYRRVRRPSETDEDAEKC 1187
                            |||..|  :..::| ||.|...|::  || :|:    .|...:.|...|
  Fly  1022 DLSSGDTNETENYEALLSLAER--LGEAKP-RGLTRNEIDQ--LPSYKF----NPEVHNGDQSSC 1077

  Fly  1188 AICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPNDALPPSSSGVPDAAN 1252
            .:|:..||:...:|.|||.|.||..|||:||.:|:.|||||.:...:.  |.:.........|..
  Fly  1078 VVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASDYF--DGVDQQQQSQATAGA 1140

  Fly  1253 SAAL 1256
            :|||
  Fly  1141 AAAL 1144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448 20/42 (48%)
zf-RING_2 1187..1228 CDD:290367 20/40 (50%)
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 20/41 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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