DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6923 and zgc:77838

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:XP_005161030.1 Gene:zgc:77838 / 402980 ZFINID:ZDB-GENE-040426-1889 Length:353 Species:Danio rerio


Alignment Length:424 Identity:86/424 - (20%)
Similarity:126/424 - (29%) Gaps:160/424 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 EQPSSSTAAIANPPAVHSIP-------------RPKRKKTEPLTME--PESDNDGDAVVASVSGT 180
            |.|.||.:.....|.:.|:|             :|:.....|.:.:  |:.|:|....:.|    
Zfish    41 EDPISSQSPDKQAPGLLSMPCLLKELHRDSAPGQPQETAPPPSSTQSGPQEDSDSSVCLRS---- 101

  Fly   181 WPAGAIEEHAMDSTAVVYEVPSSSLQLSNSSFETAPSAVNAYDDVTSSASDTEHGQFAHTRTTNT 245
                                ||||..|.:|             |..|||.:..    |.|:|.. 
Zfish   102 --------------------PSSSGHLGDS-------------DTLSSAEEVA----APTQTAG- 128

  Fly   246 TTTTSAVQAHKKKASRSNNASNTSSRAVDTDATPSTSAQSRKRQMSQFSYRKSRVLEPENESSDD 310
                       :|:.||::.|:||        |.:.:|:..:.|..|.:.|              
Zfish   129 -----------RKSRRSHSESDTS--------TVAMAAKKNRCQEKQVNGR-------------- 160

  Fly   311 GWDLRVHNPVPPIEPTVTIIRGSRGSDEAEIGHTDHNYYNSRCAVAGAPPDSTYIRSASCSTATH 375
               :||..|           |..|.....      ......|.|.|...||  .::.:|.|.:..
Zfish   161 ---VRVRGP-----------RSQRQKQRM------RQLRQKREAAARRKPD--VLQDSSTSDSDI 203

  Fly   376 TTRSVDYGSRIGRRSAATGSPST-SSDQEQE-------QQQRQQQEEIIHEERRHQQSPGQPMHS 432
            |..|            ::.||.| |||.|.|       ...|:..........|.|...|....|
Zfish   204 TAHS------------SSSSPLTASSDNEGETINSHAPAGHRRADTSGASARGRGQLDLGVASGS 256

  Fly   433 MYGVPGES--------RMSWSRAR---------PSDDSVPPRKHARMELPGRSRSKLSSTNFNSF 480
            :.||..|:        |.:..|.|         .|||.:...::..    |||:       .:||
Zfish   257 LGGVLEEALTRFAAMQRQTEERFRVWMDRLTRLHSDDDLSSSENPE----GRSQ-------VSSF 310

  Fly   481 YPGRRGHRTFAEQGNSSGQHHVRFPPSSTPNSNG 514
            .|......|.|....:........||..|...||
Zfish   311 LPSSESQETLAAYQMARLNAMTVPPPPQTAGLNG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448
zf-RING_2 1187..1228 CDD:290367
zgc:77838XP_005161030.1 RNF111_N 25..204 CDD:291949 49/259 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574550
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.