DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and ark2n

DIOPT Version :10

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:XP_005161030.1 Gene:ark2n / 402980 ZFINID:ZDB-GENE-040426-1889 Length:353 Species:Danio rerio


Alignment Length:424 Identity:86/424 - (20%)
Similarity:126/424 - (29%) Gaps:160/424 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 EQPSSSTAAIANPPAVHSIP-------------RPKRKKTEPLTME--PESDNDGDAVVASVSGT 180
            |.|.||.:.....|.:.|:|             :|:.....|.:.:  |:.|:|....:.|    
Zfish    41 EDPISSQSPDKQAPGLLSMPCLLKELHRDSAPGQPQETAPPPSSTQSGPQEDSDSSVCLRS---- 101

  Fly   181 WPAGAIEEHAMDSTAVVYEVPSSSLQLSNSSFETAPSAVNAYDDVTSSASDTEHGQFAHTRTTNT 245
                                ||||..|.:|             |..|||.:..    |.|:|.. 
Zfish   102 --------------------PSSSGHLGDS-------------DTLSSAEEVA----APTQTAG- 128

  Fly   246 TTTTSAVQAHKKKASRSNNASNTSSRAVDTDATPSTSAQSRKRQMSQFSYRKSRVLEPENESSDD 310
                       :|:.||::.|:||        |.:.:|:..:.|..|.:.|              
Zfish   129 -----------RKSRRSHSESDTS--------TVAMAAKKNRCQEKQVNGR-------------- 160

  Fly   311 GWDLRVHNPVPPIEPTVTIIRGSRGSDEAEIGHTDHNYYNSRCAVAGAPPDSTYIRSASCSTATH 375
               :||..|           |..|.....      ......|.|.|...||  .::.:|.|.:..
Zfish   161 ---VRVRGP-----------RSQRQKQRM------RQLRQKREAAARRKPD--VLQDSSTSDSDI 203

  Fly   376 TTRSVDYGSRIGRRSAATGSPST-SSDQEQE-------QQQRQQQEEIIHEERRHQQSPGQPMHS 432
            |..|            ::.||.| |||.|.|       ...|:..........|.|...|....|
Zfish   204 TAHS------------SSSSPLTASSDNEGETINSHAPAGHRRADTSGASARGRGQLDLGVASGS 256

  Fly   433 MYGVPGES--------RMSWSRAR---------PSDDSVPPRKHARMELPGRSRSKLSSTNFNSF 480
            :.||..|:        |.:..|.|         .|||.:...::..    |||:       .:||
Zfish   257 LGGVLEEALTRFAAMQRQTEERFRVWMDRLTRLHSDDDLSSSENPE----GRSQ-------VSSF 310

  Fly   481 YPGRRGHRTFAEQGNSSGQHHVRFPPSSTPNSNG 514
            .|......|.|....:........||..|...||
Zfish   311 LPSSESQETLAAYQMARLNAMTVPPPPQTAGLNG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 HRD1 <1155..>1256 CDD:227568
RING-H2_RNF111-like 1185..1230 CDD:438137
ark2nXP_005161030.1 RNF111_N <61..205 CDD:464629 42/240 (18%)
Blue background indicates that the domain is not in the aligned region.

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