DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6923 and AT5G52155

DIOPT Version :10

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_001332002.1 Gene:AT5G52155 / 28721267 AraportID:AT5G52155 Length:182 Species:Arabidopsis thaliana


Alignment Length:11 Identity:5/11 - (45%)
Similarity:9/11 - (81%) Gaps:0/11 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VIDKMPMHPIF 90
            :|:.:|.:|||
plant   171 LIEFLPKYPIF 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 HRD1 <1155..>1256 CDD:227568
RING-H2_RNF111-like 1185..1230 CDD:438137
AT5G52155NP_001332002.1 RING_Ubox 133..181 CDD:473075 3/9 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.