DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and toe-4

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_493231.1 Gene:toe-4 / 173144 WormBaseID:WBGene00012194 Length:489 Species:Caenorhabditis elegans


Alignment Length:590 Identity:123/590 - (20%)
Similarity:186/590 - (31%) Gaps:209/590 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 PRCSNMDPQRYFLPINESSMWMPGHPAPPPPPPPMPPILLPDNSSTEAYLRHQQRNLTST---PS 765
            |.|  |:||....|.:......|.....|.......|: :.:..||...:|.::|.....   |.
 Worm    37 PFC--MNPQLQTHPYDRQPTTAPRLQMMPRRDQTQNPV-IAELMSTVTRVRDRKRQRDEEAMYPR 98

  Fly   766 SSSSEQTSTQ--------------QSRHRR------SSPANVYHRYHPYYYAITTLPTVVESDYP 810
            .|...||.|:              ..|.||      ||...:               |...|...
 Worm    99 RSVGLQTDTEDVSEVLDGGTRISDMKRVRREELLDQSSLDGI---------------TFETSGTN 148

  Fly   811 PSLQPHPHPHPHFQPSQGGSSRSSLSGALNAAAVAATAAAVQAQTFSDLLSQAHNEGRAAALEGN 875
            .|.:||         ||..:|.||   :|.:.:.::::...:|...:..:.||....|      .
 Worm   149 TSDEPH---------SQIITSNSS---SLPSTSASSSSDRPRAMRSNQEMRQARRARR------Q 195

  Fly   876 RTPPHTMVHAQHQQR-QSINPPAPGVASNANLAAAVSPPPPLEMYSGRSTIPHC--GSPPFSVRR 937
            |...|.....|.:.| |.|..|.||...|                        |  |.|      
 Worm   196 RQTQHESQRMQLEHRLQQITGPVPGSEHN------------------------CMTGCP------ 230

  Fly   938 SEAAYSNRQHYQPQPHQGHQAPQNQMHAHIHPPHRASAIVATSLTPAPPYPVHQNLWYRQQSMQE 1002
                     |...|..|.||.|...:..:..||...:...:.|.|.||               ..
 Worm   231 ---------HLHQQQQQQHQQPLLHIQLNPIPPQPQTGPNSVSPTIAP---------------GA 271

  Fly  1003 MHRRHMTPTPIDLSSNAPLLTSTLRNGYLHSICSCVHARNGPVSSLDPAYYPPYDAAPAAAA--- 1064
            |.|.|      .|:|..|..:..|...|             ||..:.|........|.||||   
 Worm   272 MLRAH------PLASTFPYFSLPLTQNY-------------PVMMVLPMAAVAQQHAAAAAAVVA 317

  Fly  1065 ------------PPPSPQQQSPATSGSGNSSVAAQASMRHLQLQPQQQP---QAQQSPPVMQHMQ 1114
                        |||.|...:|                  :.::||..|   .|.::.|:..|..
 Worm   318 VAAAAAVPQPPPPPPQPTLHAP------------------VPIRPQNNPYNLYAFRNSPINVHAP 364

  Fly  1115 RQRAIHHHMF-----------------HHHYSPLHLEIGLAPLSLGSRILIAPSRPNRGATLETI 1162
            .....:..:|                 ||.:..|.|::.:                  ||:...|
 Worm   365 GYVGEYVELFRSQQFLFPTSERYGIDRHHMFGGLDLDLPV------------------GASKVEI 411

  Fly  1163 ERNTLPHKYRRVRRPSETDEDAEKCAICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPIC 1227
            :..|:|..|   .:.::.:||.:.|.:||:.||....:::|.|.|:||.:|:.:||..||.||:|
 Worm   412 DTFTIPTVY---AKKTDGEEDEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMC 473

  Fly  1228 RVDIE 1232
            |.:|:
 Worm   474 REEID 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448 17/42 (40%)
zf-RING_2 1187..1228 CDD:290367 17/40 (43%)
toe-4NP_493231.1 RING-H2_RNF111_like 431..475 CDD:319388 18/43 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162251
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBW1
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003192
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1977
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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