DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6923 and C18orf25

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_659492.1 Gene:C18orf25 / 147339 HGNCID:28172 Length:404 Species:Homo sapiens


Alignment Length:423 Identity:94/423 - (22%)
Similarity:141/423 - (33%) Gaps:85/423 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 RCESMVASSSRYADSTQNQSHSEAQFLEQPSS-STAAIANPPAVHSIPRPKRKKTEPLTMEPESD 167
            :.|.::.|.:....|.|..:..|...:|..|. ....:|:...:.|:|        .|.||...|
Human     9 KVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMP--------CLLMELRRD 65

  Fly   168 NDGDAVVASVSGTWPAGAIEEHAMDSTAVVYEVPSSS-LQLSNSSFETAPSAVNAYDDVTSSASD 231
            : .::.:||.....|          :|..|||..||: ..||.||     |...|..|..|||.:
Human    66 S-SESQLASTESDKP----------TTGRVYESDSSNHCMLSPSS-----SGHLADSDTLSSAEE 114

  Fly   232 TEHGQFAHTRTTNTTTTTSAVQAHKKKASRSNNASNTSSRAVDTDATPSTSAQSR----KRQMSQ 292
            .|..| |.|......:..|.... .:|:.||.:.|.||:.|...:...|.....|    |...||
Human   115 NEPSQ-AETAVEGDPSGVSGATV-GRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQ 177

  Fly   293 FSYRKSRVLEPENE---------------------------SSDD-----GWDLRVHNPVPPIEP 325
            ....:.|:|..:.|                           ||||     |....:...:|...|
Human   178 KHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPP 242

  Fly   326 TVTIIRGSRGSDEAEIGHTDH--------NYYNSRCAVAGAPPDSTYIRSASCSTATHTTRSVDY 382
            .|.....|..:.:.|:.:.|:        .:.||   |.|....:|:..|............:|.
Human   243 VVAHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNS---VGGQDTGATWRTSGLLEELNAEAGHLDP 304

  Fly   383 GSRIGRRSAATGSP------STSSDQEQEQQQRQQQEEIIHEERRHQQSPGQPMH---SMYGVPG 438
            |.....:::|..:|      ..|||.|.|....|:....:|......||.....|   :.| |..
Human   305 GFLASDKTSAGNAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKHGSGTQY-VST 368

  Fly   439 ESRMSWSRARPSDDSVPPRKHARMELPGRSRSK 471
            ....||:...|......|.:...:.|...||.|
Human   369 RQTQSWTAVTPQQTWASPAEVVDLTLDEDSRRK 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448
zf-RING_2 1187..1228 CDD:290367
C18orf25NP_659492.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 8/40 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..255 49/209 (23%)
RNF111_N <67..238 CDD:373730 44/187 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141572
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.