DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6923 and rnf111

DIOPT Version :9

Sequence 1:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster
Sequence 2:XP_005168980.1 Gene:rnf111 / 100151141 ZFINID:ZDB-GENE-070808-2 Length:1033 Species:Danio rerio


Alignment Length:1311 Identity:272/1311 - (20%)
Similarity:397/1311 - (30%) Gaps:513/1311 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 TRSPPTYTAMVEPRREESSGFEGLARRCDKCSSLDGLCRCESMVASSSRYADS------------ 118
            |.:||.:..|:...|.|           |:.:....|..|.|..:||.|:.||            
Zfish    99 TLTPPRHRPMLLETRSE-----------DERNPESSLSDCASSPSSSLRFGDSDTLSSDEDGMPM 152

  Fly   119 ---TQNQSHSEAQFLEQPSSSTAAIANPPAVHSIPRPKRKKTEP-LTMEPESDNDGDAVVAS--- 176
               .|.::|..|......||:..|:...|.   :.|.:..::.. ..:||:|::.....:.|   
Zfish   153 TVRQQLKAHGAASTGSTGSSTGTAVGIRPL---LARTRASRSHKWARLEPDSNHVKRPCLGSRRP 214

  Fly   177 ------VSGTWPAGAIEEH------------------AMDSTAVVYEVPSSSLQLSNSSFETAPS 217
                  |.|  .||.:.:.                  |....|:::...|||.::  :|.:::||
Zfish   215 LHRKRFVKG--GAGGVTQRTPKQKERLLLQRKKREVIARKKYALLHSTSSSSEEM--TSDDSSPS 275

  Fly   218 AVNA----YDDVTSSASDTEHGQFAHTRTTNTTTTTSAVQAHKKKASRSNNASNTSS-------- 270
            :..|    |.||.||:|.......|............|..|....||...|.::|.|        
Zfish   276 STEAEHELYVDVNSSSSQASTAAVASGVLDEDVVVIEATPAPAVPASEEINVTSTDSEVEIVTVG 340

  Fly   271 -----RAVDTDAT----PSTSAQSRKRQMSQFSYRKSRVLEPENESSDDGWDLRVHNPVPPIEPT 326
                 |:|.....    ||.| ||| .|..:..:|.|.|::|..:|:.:..||.|......:.||
Zfish   341 DAFRPRSVGGHGRMHWGPSCS-QSR-AQEGRGRHRLSTVIQPLRQSAGEVVDLTVDEDDLSVVPT 403

  Fly   327 VTIIRGSRGSDEAEIGHTDHNYYNSRCAVAGAPPDSTYIRSASCSTAT--HTTRSVDYGSRIGRR 389
            .     |..:....:..:..:  :||.|...|.|......|:|||.|.  .|..:..:|. :.| 
Zfish   404 T-----SDSTHPQPVSSSSSS--SSRNACTSASPQEGPGPSSSCSAAAPDSTLAAQSHGG-VPR- 459

  Fly   390 SAATGSPSTSSDQEQEQQQRQQQEEIIHEERRHQQSPGQPMHSMYGVPGESRMSWS-------RA 447
               :|:.:|::.:::.::....:...:...|.....   |.||....|....:|..       ::
Zfish   460 ---SGTTNTTATEDESRRSLLGENGGVAMPRLPSCC---PQHSPCSGPSSGHLSMGHTHSGCMQS 518

  Fly   448 RPSDDSVPPRKHARMELPGRSRSKLSSTNFNSFYPGRRGHRTFAEQGNSSGQHHVRFPPSSTPNS 512
            ..:..|.||:       ||...|...|.:|:.                   .||....|||....
Zfish   519 GATQQSGPPQ-------PGSQHSHTHSHHFHH-------------------HHHTAPVPSSLAYQ 557

  Fly   513 NGPCVITYVGRPRDSQPAADLNLPSTSTGRRGSHETRADSVVLTAPDLQLDDWSSDDDDDDVVFV 577
            ...|.:        .:|.|   :|:...|....:..                             
Zfish   558 ESSCPL--------ERPTA---MPAPCGGVSNQYHD----------------------------- 582

  Fly   578 HSTREPILSIDLTSDDDGLANDTQLQRDRDRGRERERERARDREPYRNDTQPNPEDPNEDRRTMY 642
                :..|.:||:|.                                                  
Zfish   583 ----QQTLPVDLSSS-------------------------------------------------- 593

  Fly   643 DCAYTFPYARRTDRRTEANNEGTSAFAFYSGALADRAAISDHNYSYELDQLMDPGPGNFYPPRCS 707
                    |.|:...:.....|||||        |...               ||..:..|...|
Zfish   594 --------AVRSSGSSSTGFHGTSAF--------DPCC---------------PGSASRPPVYVS 627

  Fly   708 NMDPQRYFLPINESSMWMPGHPAPPPPPPPM----PPILLPDNSSTEAYLRHQQRNLTSTPSSSS 768
            ...|......:.:|  :.|...|.|.|.||.    ...:.|...|....|.||        ||||
Zfish   628 QAAPGPSQQTVADS--FSPTIVAQPQPQPPQLSSCRHYMHPTYGSLSRPLHHQ--------SSSS 682

  Fly   769 SEQTSTQQSRHRRSSPANVYHRYHPYYYAITTLPT-----VVESDYPPSLQPHPHPHPHFQPSQG 828
            ...:.:.....::..|...|...||.....|.|||     .|.:..||||..|            
Zfish   683 CPHSHSNAPPPQQPPPQGDYVIPHPVLPFHTPLPTHAPGHTVPTAPPPSLPSH------------ 735

  Fly   829 GSSRSSLSGALNAAAVAATAAAVQAQTFSDLLSQAHNEGRAAALEGNRTPPHTMVHAQHQQRQSI 893
                                               |..|.:|.|..:..|.|..:  ||.     
Zfish   736 -----------------------------------HLPGSSAPLPQHLPPEHQAL--QHH----- 758

  Fly   894 NPPAPGVASNANLAAAVSPPPPLEMYSGRSTIPHCGSPPFSV---------------RRSEAAYS 943
                                           :|..|  |.||               ||....:.
Zfish   759 -------------------------------LPVLG--PNSVQRLHHHDLLQRMEVQRRRMMQHP 790

  Fly   944 NRQHYQPQPHQGHQAPQNQMHA-HIHPPHRASAIVATSLTPAPPYPVHQNLWYRQQSMQEMHRRH 1007
            .|.|.:|.||. |:...|..|. |||.|                           |:|..:.|:.
Zfish   791 TRAHERPPPHP-HRMHPNYGHGHHIHVP---------------------------QTMSSLPRQS 827

  Fly  1008 MTPTPIDLSSNAPLLTSTLRNGYLHSICSCVHARNGPVSSLDPAYYPPYDAAPAAAAPPPSPQQQ 1072
            ...|..:|...|.:..:...:|:||.     |.         |.|:||             |:  
Zfish   828 DQRTTWELGIEAGVTVAPYPSGHLHP-----HL---------PHYHPP-------------PR-- 863

  Fly  1073 SPATSGSGNSSVAAQASMRHLQLQPQQQPQAQQSPPV-MQHMQRQRAIHHHM-FHHHYSP-LHLE 1134
                             :.|.   |.|.......|.| ..|:   |.|...| |...|.. ||||
Zfish   864 -----------------LHHF---PIQLMHTGSMPEVTYPHI---RYISSRMTFGRTYEDLLHLE 905

  Fly  1135 IGLAPLSLGSRILIAPSRPNRGATLETIERNTLPHKYRR--VRRPSE------------------ 1179
            ..|..:             ||||:..||||.|.||||::  |.|.:|                  
Zfish   906 ERLGTV-------------NRGASQGTIERCTYPHKYKKKVVERDTEEQLAPEAWASVGKKMHST 957

  Fly  1180 ---------------TDEDA-EKCAICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICR 1228
                           .:||. |||.|||::.|...:|||||||||||..||||||:|||.|||||
Zfish   958 SNSRKLHGKQEEEEGAEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQLCVDQWLLTNKKCPICR 1022

  Fly  1229 VDIETHMPNDA 1239
            ||||..:.:::
Zfish  1023 VDIEAQLSSES 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448 30/42 (71%)
zf-RING_2 1187..1228 CDD:290367 28/40 (70%)
rnf111XP_005168980.1 RNF111_N 1..284 CDD:291949 40/202 (20%)
zf-RING_2 981..1022 CDD:290367 28/40 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574551
Domainoid 1 1.000 79 1.000 Domainoid score I8608
eggNOG 1 0.900 - - E33208_3BBW1
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I4580
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25205
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1977
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.820

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