DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14722 and wdr55

DIOPT Version :10

Sequence 1:NP_650111.3 Gene:CG14722 / 41419 FlyBaseID:FBgn0037943 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001342873.1 Gene:wdr55 / 3361484 PomBaseID:SPAC1A6.02 Length:361 Species:Schizosaccharomyces pombe


Alignment Length:368 Identity:101/368 - (27%)
Similarity:166/368 - (45%) Gaps:48/368 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 AAIKKPRSSPPEIKLEDFITDI-CFHPDRDIIALATIIGDVHLYEYDNEANKLLR--TIEVHSKA 202
            ||||:        |.|:.|.|: ||..::.::..:.  |.|..|:||.....|:.  :.:.|.|:
pombe     7 AAIKQ--------KFENEIFDLACFGENQVLLGFSN--GRVSSYQYDVAQISLVEQWSTKRHKKS 61

  Fly   203 CRDVEFTEDGRFLLTCSKDKCVMVTDMETEKLKKLYETAHDDAINTLHVL----NENLFASGDDA 263
            ||::...|.|...::...|..:.:.|..|.::...:....:..|:...|:    |:.:||:|||.
pombe    62 CRNISVNESGTEFISVGSDGVLKIADTSTGRVSSKWIVDKNKEISPYSVVQWIENDMVFATGDDN 126

  Fly   264 GTVKLWDLRTKNAIFEL-KELEDQITQLTTNEQSKLLLATSADGYLTTFNISARKMYVQSEPYEE 327
            |.|.:||.||:..|... .:..|.|:.::..|: :..:|||.||.|:..:....|..:.||..:|
pombe   127 GCVSVWDKRTEGGIIHTHNDHIDYISSISPFEE-RYFVATSGDGVLSVIDARNFKKPILSEEQDE 190

  Fly   328 ELNCMGVYRGD----SKLVVGTSKGRLYTYNWGQFGYHCDMYPGIKSPI---SLMIPITDRI--- 382
            |:.| |.:..|    .|..|||:.|.:..:..|.:|.|.|.   |.|||   ...|....|.   
pombe   191 EMTC-GAFTRDQHSKKKFAVGTASGVITLFTKGDWGDHTDR---ILSPIRSHDFSIETITRADSD 251

  Fly   383 -ACVAGEDGNIRACHIAPYRNLGVVGQHN--MPIESLDVNASGELIASSSHNNDVRFWNVKYFED 444
             ..|.|.||.||..||.|.:...::|||:  ..::::||...|..:.|.| ..::.||.|     
pombe   252 SLYVGGSDGCIRLLHILPNKYERIIGQHSSRSTVDAVDVTTEGNFLVSCS-GTELAFWPV----- 310

  Fly   445 FGDIKYNEKHNAYKEQRHNLPSSKCSNASDFFSDLTKENADGD 487
                  ::|.........||.|.:.|::...||...|:...|:
pombe   311 ------DQKEGDESSSSDNLDSDEDSSSDSEFSSPKKKKKVGN 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14722NP_650111.3 WD40 156..438 CDD:475233 85/302 (28%)
WD40 repeat 160..198 CDD:293791 9/40 (23%)
WD40 repeat 203..239 CDD:293791 7/35 (20%)
WD40 repeat 247..284 CDD:293791 14/41 (34%)
WD40 repeat 287..354 CDD:293791 21/70 (30%)
WD40 repeat 367..406 CDD:293791 15/45 (33%)
WD40 repeat 413..437 CDD:293791 5/23 (22%)
wdr55NP_001342873.1 WD40 repeat 17..54 CDD:293791 10/38 (26%)
WD40 <56..311 CDD:441893 76/271 (28%)
WD40 repeat 64..99 CDD:293791 5/34 (15%)
WD40 repeat 109..146 CDD:293791 14/36 (39%)
WD40 repeat 151..185 CDD:293791 9/34 (26%)
WD40 repeat 193..239 CDD:293791 16/49 (33%)
WD40 repeat 242..278 CDD:293791 11/35 (31%)

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