DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG14718 and Zranb2

DIOPT Version :9

Sequence 1:	NP_650107.1	Gene:	CG14718 / 41413	FlyBaseID:	FBgn0037939	Length:	446	Species:	Drosophila melanogaster
Sequence 2:	NP_113804.2	Gene:	Zranb2 / 58821	RGDID:	61854	Length:	330	Species:	Rattus norvegicus

Alignment Length:	80	Identity:	29/80 - (36%)
Similarity:	41/80 - (51%)	Gaps:	5/80 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly   342 NWVC--MLCRNSNFVWRSSCNRCQADKVV-APQNNEGSSWAGSREEDGAPRRWRPYRNDWLCKIC 403
            :|:|  ..|.|.||..|:|||||..:|.. |.....|.:..|....:.:  |.....|||.||.|
  Rat    12 DWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKS--RGLFSANDWQCKTC 74

  Fly   404 YNMNFWYRAKCNRCH 418
            .|:|:..|::||.|:
  Rat    75 SNVNWARRSECNMCN 89

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG14718	NP_650107.1	RRM	<222..>335	CDD:223796
		RRM_SF	223..302	CDD:302621
		zf-RanBP	343..366	CDD:279035	12/24 (50%)
		RanBP2-type Zn finger	343..362	CDD:275375	10/20 (50%)
		zf-RanBP	397..423	CDD:295417	11/22 (50%)
		RanBP2-type Zn finger	398..417	CDD:275375	9/18 (50%)
Zranb2	NP_113804.2	ZnF_RBZ	11..35	CDD:197784	11/22 (50%)
		RanBP2-type Zn finger	13..34	CDD:275376	10/20 (50%)
		ZnF_RBZ	67..91	CDD:197784	12/23 (52%)
		RanBP2-type Zn finger	69..88	CDD:275376	9/18 (50%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	117..330
		Required for nuclear targeting. /evidence=ECO:0000250	151..324
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1995
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810