DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14718 and ewsr1

DIOPT Version :9

Sequence 1:NP_650107.1 Gene:CG14718 / 41413 FlyBaseID:FBgn0037939 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_989309.1 Gene:ewsr1 / 394931 XenbaseID:XB-GENE-6258537 Length:674 Species:Xenopus tropicalis


Alignment Length:471 Identity:112/471 - (23%)
Similarity:164/471 - (34%) Gaps:139/471 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TSASVVYTNSFYAPNYSDTQQPQPQLQTQQQMF--HANYIVGTTLG--------SGLGFNFA--- 55
            ||.|...|:|:...:||     ||...|||..:  .|:|...::.|        ||.|...:   
 Frog   194 TSYSSSQTSSYEQSSYS-----QPSSYTQQSGYGQQASYSQQSSYGQPSSYGQQSGYGQQSSYQA 253

  Fly    56 --------PAPIPQASAASGLSPRGMYSDLYRYEDGSGDASGSLLLVQEDDHFCGAEADQQLVAS 112
                    |...|..|::....|.|.|        |...:|.........||             
 Frog   254 PPQQQQPPPTSYPPPSSSYSSQPPGQY--------GQQSSSYGQQSSYRPDH------------- 297

  Fly   113 TSSSCP--------MASSGESVSIDTEQEAERDLQMNQCETLEREELN----GDIGEMGEMEELA 165
            :||..|        .:||||:..........|...|     .||..::    |..|.||.     
 Frog   298 SSSKSPYGQEPHQGFSSSGENRGSGGSDSRSRGRGM-----FERGGMSRGGRGSRGGMGS----- 352

  Fly   166 EEVNGEQRPPLLPCMGGNTSYMVFPRTAADYMPRLALPRHRPY---ISIGQEQYVIQAETVFVLG 227
                           ||:.:....|....|..|.|.|....|.   :.:..|   :::.|::|.|
 Frog   353 ---------------GGDRAGFSKPGGLLDDGPDLDLGPPMPLPLPLDLEDE---LESSTIYVQG 399

  Fly   228 MRLNVTKNDIILFFGKVGVIKMDESTNKPKIFVYKNKITGRSKGEATITYVSPFSAQAAISCLSG 292
            :..|||..:|:.||...|.:|:::.|.:|.:.::.:|.||:.||:.|:::..|.||:.||....|
 Frog   400 LNDNVTVEEIVDFFKHCGDVKINKRTGEPLVNLFMDKETGKPKGDGTVSFEDPPSAKTAIELCDG 464

  Fly   293 AKFMGQVITVLPAYLSTRRGSVR--------YSYPRELNA-----------------PEHQRRQR 332
            ....|..:.|..|...:..||:|        ...|..|..                 |   |..|
 Frog   465 KDLNGNKVKVSLARKKSLLGSMRGGSLLRDNRGQPPPLRGGPMGRLGGRGGERGGFMP---RGPR 526

  Fly   333 AMKWKPAIDN-------WVCML--CRNSNFVWRSSCNRCQADK------VVAPQNNE----GSSW 378
            ..:..|...|       |.|..  |.|.||.||:.||:|:|.|      ...||..|    |...
 Frog   527 GPRGSPVSGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPDGPFPPFPPQGGERGRGGPGM 591

  Fly   379 AGSR--EEDGAPRRWR 392
            .|.|  .:.|.|..:|
 Frog   592 RGGRGLMDRGVPGMFR 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14718NP_650107.1 RRM <222..>335 CDD:223796 36/137 (26%)
RRM_SF 223..302 CDD:302621 25/78 (32%)
zf-RanBP 343..366 CDD:279035 12/24 (50%)
RanBP2-type Zn finger 343..362 CDD:275375 10/20 (50%)
zf-RanBP 397..423 CDD:295417
RanBP2-type Zn finger 398..417 CDD:275375
ewsr1NP_989309.1 PRK14949 <22..>142 CDD:237863
RRM_SF 393..476 CDD:388407 27/82 (33%)
zf-RanBP 541..567 CDD:366216 11/25 (44%)
RanBP2-type Zn finger 544..565 CDD:275375 10/20 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1539664at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23238
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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