DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14718 and fust-1

DIOPT Version :9

Sequence 1:NP_650107.1 Gene:CG14718 / 41413 FlyBaseID:FBgn0037939 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_495483.1 Gene:fust-1 / 174175 WormBaseID:WBGene00016173 Length:448 Species:Caenorhabditis elegans


Alignment Length:504 Identity:108/504 - (21%)
Similarity:141/504 - (27%) Gaps:199/504 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YAPNYSDTQQPQPQLQTQQQMFHANYIVGTTLGSGLGFNFAPAP-IPQASAASGLSPRGMYSDLY 78
            |...|...||.||..|..|..:.|     ...|   |.:.|..| .|.|....|..|        
 Worm    20 YWAYYQQQQQQQPGGQPDQDPYAA-----AAYG---GHDQAQQPQNPYAPPPPGADP-------- 68

  Fly    79 RYEDGSGDASGSLLLVQEDDH----------FCGAEADQQLVASTSSSCPMASSGESVSIDTEQE 133
             |..|||..||.     .|.:          |.|:............|......|          
 Worm    69 -YGQGSGGQSGG-----SDPYGQSRGGGRGGFGGSRGGGGYDGGRGGSRGGYDGG---------- 117

  Fly   134 AERDLQMNQCETLEREELNGDIGEMGEMEELAEEVNGEQR---------------PPLLPCMGGN 183
                          |....||.|..|...   ...:||:|               ||     ||.
 Worm   118 --------------RGGYGGDRGGRGGGR---GGYDGERRGGSRWDDGNSDRQGGPP-----GGR 160

  Fly   184 TSYM------VFPRTAADYMPRLALPRHRPYISIGQEQYVIQAETVFVLGMRLNVTKNDIILFFG 242
            ..|.      ..|.:...|....|...:|.:   |.:..|...|||||.|:.....:..|...|.
 Worm   161 GGYQDRGPRRDGPPSGGGYGGGGAASGNREF---GSDGRVELKETVFVQGISTTANEAYIADVFS 222

  Fly   243 KVG-VIKMDESTNKPKIFVYKNKITGRSKGEATITYVSPFSAQAAISCLSGAKFMGQVITVLPAY 306
            ..| :.|.|..   |:|.:|.::.||..|||..||:|...:||.||:..:|..|.|....:..:.
 Worm   223 TCGDIAKNDRG---PRIKIYTDRNTGEPKGECMITFVDASAAQQAITMYNGQPFPGGSSPMSISL 284

  Fly   307 LSTR------------------------------------------------------------- 310
            ...|                                                             
 Worm   285 AKFRADAGGERGGRGGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDR 349

  Fly   311 ---------------RGSVR----------YSYPREL---NAPEHQRRQRAMKWKPAIDNWVCML 347
                           ||..|          :...|.:   ||...||:          ::|.|..
 Worm   350 GGFRGGDRGGFRGGDRGGFRGGDRGGDRGGFRGGRGVGGGNANMEQRK----------NDWPCEQ 404

  Fly   348 CRNSNFVWRSSCNRCQADKVVAPQNNEGSSWAGSREEDGAP--RRWRPY 394
            |.||||.:|..||:||     ||:.:.||...|.....|.|  .|:|||
 Worm   405 CGNSNFAFRRECNQCQ-----APRPDGGSGGGGGERRGGPPGGDRYRPY 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14718NP_650107.1 RRM <222..>335 CDD:223796 37/202 (18%)
RRM_SF 223..302 CDD:302621 27/79 (34%)
zf-RanBP 343..366 CDD:279035 12/22 (55%)
RanBP2-type Zn finger 343..362 CDD:275375 10/18 (56%)
zf-RanBP 397..423 CDD:295417
RanBP2-type Zn finger 398..417 CDD:275375
fust-1NP_495483.1 RRM <202..>290 CDD:223796 29/90 (32%)
RRM_FET 203..284 CDD:240726 27/83 (33%)
ZnF_RBZ 398..421 CDD:197784 12/27 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I7605
eggNOG 1 0.900 - - E1_KOG1995
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23238
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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