DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14718 and fus

DIOPT Version :9

Sequence 1:NP_650107.1 Gene:CG14718 / 41413 FlyBaseID:FBgn0037939 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_012809196.1 Gene:fus / 100038234 XenbaseID:XB-GENE-495119 Length:554 Species:Xenopus tropicalis


Alignment Length:407 Identity:101/407 - (24%)
Similarity:139/407 - (34%) Gaps:136/407 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NYSDTQQ---PQPQLQTQQQMFHANYI--VGTTLGSGLGFNFAPAPIPQASAASGLSPRGMY--S 75
            :|...||   .|||...|||..::..:  |.....:| |:| ..:|...:.:..|.|.:|.|  .
 Frog   176 SYGQQQQSSYSQPQGYGQQQTQYSGGVPDVYDLFPAG-GYN-QDSPSMGSGSYGGGSDQGGYGGQ 238

  Fly    76 DLYRYEDGSGDASGSLLLVQEDDHFCGAEADQQLVASTSSSCPMASSGESVSIDTEQEAERDLQM 140
            |..|...|.|...|                              ...|.:...|:.....|    
 Frog   239 DRGRGRGGFGGRGG------------------------------GGGGGAGGFDSRGRGSR---- 269

  Fly   141 NQCETLEREELNGDIGEMGEMEELAEEVNGEQRPPLLPCMGGNTSYMVFPRTAADYMPRLALPRH 205
                        |..|.||         .||:         |..|....||...      ..|||
 Frog   270 ------------GGRGGMG---------GGER---------GGFSKFGGPREGG------GPPRH 298

  Fly   206 RPYISIGQEQYVIQAETVFVLGMRLNVTKNDIILFFGKVGVIKMDESTNKPKIFVYKNKITGRSK 270
            ..     .||......|:||.|:..|||...:..:|.::|:||.::.|.:|.|.:|.::.||:.|
 Frog   299 EM-----AEQDNSDNNTIFVQGLGENVTVESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLK 358

  Fly   271 GEATITYVSPFSAQAAISCLSGAKFMGQVITVL-------------------------------- 303
            ||||:::..|.||:|||....|.:|.|..|.|.                                
 Frog   359 GEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNSRGGGNGRGRGRGGGPMGRGGFG 423

  Fly   304 --PAYLSTRRGSVRYSYPRELNAPEHQRRQRAMKWK---PAIDNWVCMLCRNSNFVWRSSCNRCQ 363
              |....:|.||  ..||.....     :|||..||   |:        |.|.||.||:.||:|:
 Frog   424 GPPGGSGSRGGS--GGYPSGGGG-----QQRAGDWKCPNPS--------CENMNFSWRNECNQCK 473

  Fly   364 ADKVVAPQNNEGSSWAG 380
            |.|...|....||...|
 Frog   474 APKPEGPGGPGGSHMGG 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14718NP_650107.1 RRM <222..>335 CDD:223796 42/146 (29%)
RRM_SF 223..302 CDD:302621 31/78 (40%)
zf-RanBP 343..366 CDD:279035 10/22 (45%)
RanBP2-type Zn finger 343..362 CDD:275375 8/18 (44%)
zf-RanBP 397..423 CDD:295417
RanBP2-type Zn finger 398..417 CDD:275375
fusXP_012809196.1 RRM <298..>398 CDD:223796 36/104 (35%)
RRM_FUS_TAF15 307..392 CDD:240979 33/84 (39%)
zf-RanBP 447..474 CDD:279035 14/34 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1539664at2759
OrthoFinder 1 1.000 - - FOG0002238
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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