DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and mespa

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001039184.1 Gene:mespa / 734031 XenbaseID:XB-GENE-920825 Length:310 Species:Xenopus tropicalis


Alignment Length:167 Identity:49/167 - (29%)
Similarity:68/167 - (40%) Gaps:29/167 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QEAPPPPIVPYQELIAGFPCTD--LSLWQRSQV-----TPLVPQRPSTNGRANGS---------- 71
            |...|....|.|:.  |:|.::  .||...|.:     :|..|.....| .|.||          
 Frog    12 QSLSPQQCNPLQQW--GYPDSEGYCSLSPASSIDSSGFSPPYPSCAFAN-EAYGSIHTAFTQMEK 73

  Fly    72 -------SSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVP--TFAYEKRLSRIET 127
                   :|:.|..|.|......|.:|:.||:.||.||:.|...|||.:|  .....|.|::|||
 Frog    74 LKSKPQDTSTKKDQRNRKVYDRVRNSASEREKMRMRNLSSALQNLRRYLPPAVAPIGKTLTKIET 138

  Fly   128 LRLAITYIGFMAELLSGTPSNSHKSRSDVYGSMNGHH 164
            |||.|.||..::|:|........|.|.:.....|..|
 Frog   139 LRLTIRYISHLSEVLGLDEETLIKRREEEMRRSNMCH 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 22/49 (45%)
mespaNP_001039184.1 bHLH_SF 97..160 CDD:381792 26/62 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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