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Protein Alignment Fer3 and mespa
DIOPT Version :9
Sequence 1: | NP_524322.1 |
Gene: | Fer3 / 41411 |
FlyBaseID: | FBgn0037937 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001039184.1 |
Gene: | mespa / 734031 |
XenbaseID: | XB-GENE-920825 |
Length: | 310 |
Species: | Xenopus tropicalis |
Alignment Length: | 167 |
Identity: | 49/167 - (29%) |
Similarity: | 68/167 - (40%) |
Gaps: | 29/167 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 QEAPPPPIVPYQELIAGFPCTD--LSLWQRSQV-----TPLVPQRPSTNGRANGS---------- 71
|...|....|.|:. |:|.:: .||...|.: :|..|.....| .|.||
Frog 12 QSLSPQQCNPLQQW--GYPDSEGYCSLSPASSIDSSGFSPPYPSCAFAN-EAYGSIHTAFTQMEK 73
Fly 72 -------SSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVP--TFAYEKRLSRIET 127
:|:.|..|.|......|.:|:.||:.||.||:.|...|||.:| .....|.|::|||
Frog 74 LKSKPQDTSTKKDQRNRKVYDRVRNSASEREKMRMRNLSSALQNLRRYLPPAVAPIGKTLTKIET 138
Fly 128 LRLAITYIGFMAELLSGTPSNSHKSRSDVYGSMNGHH 164
|||.|.||..::|:|........|.|.:.....|..|
Frog 139 LRLTIRYISHLSEVLGLDEETLIKRREEEMRRSNMCH 175
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer3 | NP_524322.1 |
HLH |
87..135 |
CDD:278439 |
22/49 (45%) |
mespa | NP_001039184.1 |
bHLH_SF |
97..160 |
CDD:381792 |
26/62 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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