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Protein Alignment Fer3 and Msgn1
DIOPT Version :9
Sequence 1: | NP_524322.1 |
Gene: | Fer3 / 41411 |
FlyBaseID: | FBgn0037937 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001103021.1 |
Gene: | Msgn1 / 689864 |
RGDID: | 1587516 |
Length: | 187 |
Species: | Rattus norvegicus |
Alignment Length: | 157 |
Identity: | 42/157 - (26%) |
Similarity: | 63/157 - (40%) |
Gaps: | 41/157 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 WGQEAPPPPIVPYQELIAGFPCTDL----SLWQRSQVTPLVPQRPSTNGRANGSSS--------- 73
|...|.| .|||...|...| ||...|:|........::.|.::|.||
Rat 29 WKSRARP------LELIQASPTQSLSPVPSLESYSEVALPCGHSGASTGGSDGYSSHEAGGLVEL 87
Fly 74 ------------------SSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEK 120
..:|..:...|:.:||.|:.||:.||..|.:|...||..:|. .|.:
Rat 88 DYSMLAFQPSYIHAAGGLKGQKGSKVKMSVQRRRKASEREKLRMRTLADALHTLRNYLPP-VYSQ 151
Fly 121 R---LSRIETLRLAITYIGFMAELLSG 144
| |::|:||:..|.||..:.:||:|
Rat 152 RGQPLTKIQTLKYTIKYIRELTDLLNG 178
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer3 | NP_524322.1 |
HLH |
87..135 |
CDD:278439 |
19/50 (38%) |
Msgn1 | NP_001103021.1 |
HLH |
119..173 |
CDD:278439 |
21/54 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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