DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and Tcf23

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_001067558.2 Gene:Tcf23 / 688600 RGDID:1586500 Length:215 Species:Rattus norvegicus


Alignment Length:181 Identity:48/181 - (26%)
Similarity:68/181 - (37%) Gaps:64/181 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EAPPPPIV----PYQELIAGFPCTD----------LSLW--------QRSQVTPLVPQRPSTNGR 67
            |||..|..    |...|:.|   ||          ..||        :.|:||. .|:|....|.
  Rat     7 EAPAMPEAGRNKPKARLLLG---TDRKRSRLNRTRQDLWDDTSWSNHRLSRVTS-APRRTRARGT 67

  Fly    68 ANGSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAI 132
            |:|.|.:|.:           .||  |||.|:..|.:||..|:..:|....:.:||:::.|.||.
  Rat    68 AHGRSEASPE-----------NAA--RERTRVKTLRQAFLALQAALPAVPPDTKLSKLDVLVLAT 119

  Fly   133 TYIGFMAELLSGTPSNSHKSRSDVYGSMNGHHQAPPPAIHP-----HHLHP 178
            :||..:...|.                    |:.|.||..|     .:|||
  Rat   120 SYIAHLTRTLG--------------------HELPGPAWPPFLRGLRYLHP 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 16/47 (34%)
Tcf23XP_001067558.2 HLH 80..129 CDD:197674 17/50 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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