DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and atoh8

DIOPT Version :10

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001073460.2 Gene:atoh8 / 561606 ZFINID:ZDB-GENE-061215-7 Length:266 Species:Danio rerio


Alignment Length:124 Identity:38/124 - (30%)
Similarity:64/124 - (51%) Gaps:17/124 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LSLWQRSQVTPL----VPQRPSTNGRANGSSSSSKKTRR-----------RVASMAQRRAANIRE 95
            :|:....||.||    :.||.::...|.||..:....:|           :.....:|..||.||
Zfish   120 VSVLSAPQVFPLERVVLSQRAASQAPAGGSERAESPRKRAGEPSGVVTEIKAIQQTRRLLANARE 184

  Fly    96 RRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAEL--LSGTPSNSHKS 152
            |.|:..::.||:.||::||.::|.::||::..||:|..||..:|:|  |..||.:.:.|
Zfish   185 RTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLAQLADLDYTPDHRNMS 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 24/75 (32%)
atoh8NP_001073460.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..164 4/23 (17%)
bHLH_TS_ATOH8 169..236 CDD:381427 24/66 (36%)
Basic motif, degenerate. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 175..188 6/12 (50%)
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 189..227 14/37 (38%)

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