DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and twist1b

DIOPT Version :10

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001017820.1 Gene:twist1b / 550518 ZFINID:ZDB-GENE-050417-357 Length:169 Species:Danio rerio


Alignment Length:137 Identity:45/137 - (32%)
Similarity:64/137 - (46%) Gaps:33/137 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PCTDLSLWQRSQVTPL--------VPQRP-----------STNGRANGSSSSSKKTRRRVAS--- 84
            |..|.|   .|.|:|.        .|.||           ..||..:.||:..|:.::...|   
Zfish     5 PARDSS---SSPVSPADSLSNSDGEPDRPPKRCARKRRSSKKNGEDSDSSTLGKRGKKSSNSSNS 66

  Fly    85 -------MAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELL 142
                   ..||..||:|||:|..:|||||..||:.:||...:| ||:|:||:||..||.|:.::|
Zfish    67 PQSFEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYIDFLCQVL 130

  Fly   143 SGTPSNS 149
            .....:|
Zfish   131 QSDELDS 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 29/72 (40%)
twist1bNP_001017820.1 bHLH_TS_TWIST1 65..141 CDD:381418 30/74 (41%)

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