DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer3 and figla

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001016342.1 Gene:figla / 549096 XenbaseID:XB-GENE-966403 Length:203 Species:Xenopus tropicalis


Alignment Length:130 Identity:35/130 - (26%)
Similarity:58/130 - (44%) Gaps:37/130 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PPPPIVPYQELIAGFPCTDLSLWQRSQVTPLVPQRPSTNGRANGSSSSSKKTRRRVAS------- 84
            |||.::  .|::            |...||| |...|.|           |.:|..:.       
 Frog    14 PPPELL--GEVL------------REHYTPL-PYMASIN-----------KMKRLPSGHYFCMEN 52

  Fly    85 ----MAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELLSGT 145
                :.:|:|||.:||.|:.|:|..|.||:..||....:::.|:::||:.|..||..:.::|..|
 Frog    53 FEEVLERRQAANAKERERIRNINSGFSKLKTIVPLIPKDRKPSKVDTLKAATEYIRLLHDILEET 117

  Fly   146  145
             Frog   118  117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 18/47 (38%)
figlaNP_001016342.1 HLH 58..115 CDD:238036 20/56 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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