DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer3 and Figla

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_575589.1 Gene:Figla / 500239 RGDID:1564754 Length:195 Species:Rattus norvegicus


Alignment Length:137 Identity:32/137 - (23%)
Similarity:52/137 - (37%) Gaps:44/137 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 MAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELLSGT---- 145
            :.:||.||.:||.|:.|||..|.||:..||.....::.|:::.|:.|..||..:..:|.|.    
  Rat    59 LERRRVANAKERERIKNLNRGFAKLKALVPFLPQSRKPSKVDILKGATEYIRILGCVLEGAKASE 123

  Fly   146 -------------PSNSHKSRSD------------------------VYG---SMNGHHQAPPPA 170
                         ||:.|.|.:.                        .||   .:..:||:..|.
  Rat   124 KQGPEEQQVHSSRPSDPHVSSTRELLGNATQPTGCASGLKKEEEGPWAYGGHSELYSYHQSAVPE 188

  Fly   171 IHPHHLH 177
            ...:.:|
  Rat   189 TRSYFIH 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 18/47 (38%)
FiglaXP_575589.1 bHLH_TS_FIGLA 62..117 CDD:381428 20/54 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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