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Protein Alignment Fer3 and atoh1b
DIOPT Version :9
Sequence 1: | NP_524322.1 |
Gene: | Fer3 / 41411 |
FlyBaseID: | FBgn0037937 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001122151.1 |
Gene: | atoh1b / 493915 |
ZFINID: | ZDB-GENE-041201-1 |
Length: | 206 |
Species: | Danio rerio |
Alignment Length: | 113 |
Identity: | 42/113 - (37%) |
Similarity: | 56/113 - (49%) |
Gaps: | 9/113 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 PQRPSTNGRANGSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLS 123
||..|.:..|...:....|.........:|.|||.||||||..||.||||||..:|:...||:||
Zfish 66 PQAASEDHHAGSKARPGSKASVSGPQRHRRVAANARERRRMHGLNRAFDKLRSVIPSLENEKKLS 130
Fly 124 RIETLRLAITYIGFMAELLSGTPSNSHKSRSDVYGSMNGHHQAPPPAI 171
:.:||::|..||..::|||.|...: |:......|.|.||
Zfish 131 KYDTLQMAQIYITELSELLEGVVQS---------GAPGSQRTAIPYAI 169
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer3 | NP_524322.1 |
HLH |
87..135 |
CDD:278439 |
26/47 (55%) |
atoh1b | NP_001122151.1 |
HLH |
92..150 |
CDD:238036 |
30/57 (53%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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