DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer3 and HLH54F

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster


Alignment Length:99 Identity:34/99 - (34%)
Similarity:55/99 - (55%) Gaps:8/99 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NGSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAIT 133
            :.||.||:..       .||.|||.|||.||..|:.|:.:|:.|:|....:.:||:::|||||..
  Fly    21 DASSQSSQPP-------VQRNAANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATL 78

  Fly   134 YI-GFMAELLSGTPSNSHKSRSDVYGSMNGHHQA 166
            || ..:..:.:|:.|.:|....:.:.|:|..|.:
  Fly    79 YIKQLITAVETGSHSQNHPHNHNQHHSLNHSHSS 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 22/47 (47%)
HLH54FNP_477302.1 HLH 32..83 CDD:278439 24/50 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452829
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23349
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.