DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer3 and cato

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster


Alignment Length:145 Identity:46/145 - (31%)
Similarity:75/145 - (51%) Gaps:22/145 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TYMPDVPFQPLWGQEAPPPPIVPYQELIAGFPCTDLSLWQRSQVTPLVP-----QRPSTNGRAN- 69
            |.:|.|..|. :||.|...|...:.:...|         .::::.|::.     .:|.|..|:| 
  Fly    26 TQLPPVSGQD-YGQGAFLSPEWQFLDAAGG---------TQTELGPIMEAQGQHTQPQTKRRSNS 80

  Fly    70 -----GSSSSSKKTRRRVASMAQRR-AANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETL 128
                 |..||.::|........:|| |||.|||:||..||.||::||..||..:.:::||:.|||
  Fly    81 FTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETL 145

  Fly   129 RLAITYIGFMAELLS 143
            ::|.:||..:.:||:
  Fly   146 QMAQSYILALCDLLN 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 24/48 (50%)
catoNP_477344.1 HLH 104..155 CDD:278439 26/50 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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