DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and Atoh7

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001163953.1 Gene:Atoh7 / 365564 RGDID:1304957 Length:149 Species:Rattus norvegicus


Alignment Length:114 Identity:45/114 - (39%)
Similarity:63/114 - (55%) Gaps:19/114 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 RVASMAQRR-AANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELLSG 144
            |:.|.|:|| |||.||||||..||.|||:|||.||.:..:|:||:.|||::|::||..:..:|: 
  Rat    35 RLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIVALTRILA- 98

  Fly   145 TPSNSHKSRSDVYG---SMNGHHQAPPPAIHPHHLHPAAAYQRDFASPY 190
                  ::..|..|   ...|.:       ||:...|.|..|.| ..||
  Rat    99 ------EAERDWVGLRCEQRGRN-------HPYLPFPGARLQVD-PEPY 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 28/48 (58%)
Atoh7NP_001163953.1 HLH 54..99 CDD:197674 21/51 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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