DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and Bhlha9

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_038943763.1 Gene:Bhlha9 / 363656 RGDID:1311234 Length:230 Species:Rattus norvegicus


Alignment Length:130 Identity:46/130 - (35%)
Similarity:65/130 - (50%) Gaps:23/130 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFM 138
            :.:|..|...|.|:|.|||:|||:|:.:.||||:.|||.:......||||:|.|||.||..|..:
  Rat    48 AGRKRERPARSKARRMAANVRERKRILDYNEAFNALRRALQHDLGGKRLSKIATLRRAIHRITAL 112

  Fly   139 AELLSGTPSNSHKSRSDVYGSMNGHHQAP------------PPAIHPHHLHPAA--AYQRDFASP 189
            :.:|..:|:.....     |.:..|.||.            |.::    |.|||  ..:||.|||
  Rat   113 SLVLRASPAPRWPC-----GHLECHGQAAHGSSAGDSGFSVPRSV----LSPAAPSLARRDTASP 168

  Fly   190  189
              Rat   169  168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 25/47 (53%)
Bhlha9XP_038943763.1 bHLH_TS_bHLHa9 54..116 CDD:381482 29/61 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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