DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and ascl1a

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_571294.1 Gene:ascl1a / 30466 ZFINID:ZDB-GENE-980526-90 Length:196 Species:Danio rerio


Alignment Length:175 Identity:46/175 - (26%)
Similarity:71/175 - (40%) Gaps:58/175 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QRSQVTPLVPQRPSTNGRANGSSSSSKKTRRRVAS----MAQRR-------------------AA 91
            |..|::|       |:.:.:..|:|.:..|:|.:|    ..:||                   ..
Zfish    26 QSIQLSP-------TDSQCSNKSASKQAKRQRSSSPELLRCKRRLNFAGFGYSLPQQQPHAVARR 83

  Fly    92 NIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELL-----------SG- 144
            |.|||.|:..:|..|..||..||..|..|::|::||||.|:.||..:.:||           || 
Zfish    84 NERERNRVKLVNNGFATLREHVPNGAANKKMSKVETLRSAVEYIRALQQLLDEHDAVSAAFQSGV 148

  Fly   145 -TPSNSHKSRSDVYGSMNGHHQAPPPAIHPHHLHPAAAYQRDFAS 188
             :|:.|....:|: .||.|              .|.::|..|..|
Zfish   149 LSPTISQNYSNDM-NSMAG--------------SPVSSYSSDEGS 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 21/66 (32%)
ascl1aNP_571294.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..54 5/20 (25%)
HLH 94..136 CDD:197674 18/41 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..186 8/35 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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