DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3 and Neurog1

DIOPT Version :9

Sequence 1:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_062080.1 Gene:Neurog1 / 29410 RGDID:3167 Length:244 Species:Rattus norvegicus


Alignment Length:161 Identity:52/161 - (32%)
Similarity:74/161 - (45%) Gaps:40/161 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PYQELIAGFPC------TDLSLW-----QRSQVTPL-------VPQR---PSTNGRAN---GSSS 73
            |.:..::...|      :|||.:     ..:::.||       ||.|   |:.:|.:|   |...
  Rat     4 PLETCLSDLDCASSNSGSDLSSFLTDEEDCARLQPLASTSGLSVPARRSAPTLSGASNVPGGQDE 68

  Fly    74 SSKKTRR----RVASMA--------QRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIE 126
            ..::.||    ||.|.|        :|..||.|||.||.|||.|.|.||..:|:|..:.:|::||
  Rat    69 EQERRRRRGRARVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIE 133

  Fly   127 TLRLAITYIGFMAELL----SGTPSNSHKSR 153
            |||.|..||..:||.|    .|.|....:.|
  Rat   134 TLRFAYNYIWALAETLRLADQGLPGGGARER 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3NP_524322.1 HLH 87..135 CDD:278439 24/47 (51%)
Neurog1NP_062080.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..84 11/40 (28%)
bHLH_TS_NGN1_NeuroD3 83..154 CDD:381559 31/70 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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